BLASTX nr result

ID: Atractylodes22_contig00053688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053688
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865494.1| hypothetical protein ARALYDRAFT_494763 [Arab...    55   8e-06

>ref|XP_002865494.1| hypothetical protein ARALYDRAFT_494763 [Arabidopsis lyrata subsp.
           lyrata] gi|297311329|gb|EFH41753.1| hypothetical protein
           ARALYDRAFT_494763 [Arabidopsis lyrata subsp. lyrata]
          Length = 806

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
 Frame = -3

Query: 511 SSRSEKGRISNVIAKLMGLEEIP-GKVDTQSKRDESKNTEPRIGQAEKQVNKIPEPVKDA 335
           S + +KGRI +V+AKLMGL E P  + +T +K D    T PR+ Q  + + ++    K  
Sbjct: 279 SVKPQKGRIPSVVAKLMGLGEFPEDEKETNNKNDAENLTRPRVMQVSENLVELKAQRKST 338

Query: 334 RVSL-NNRASQQSPDLNTNGVPRPLKTAAPERQSNGETKAKMQQKRRSPEVAANLRQERV 158
            + L  ++ +Q + ++N                     KAK QQK R    + + ++ +V
Sbjct: 339 SLDLVIHKETQTANEIN--------------------YKAKSQQKDREKNDSNSRKRSKV 378

Query: 157 EKKKTIRMGKSNEIKLVSRMQEPEKRTQKSKQDSQQ 50
             KK   M   N IK   R Q P +   K    SQQ
Sbjct: 379 SYKKDGEMTTKNVIK---RNQSPTENKHKVVARSQQ 411


Top