BLASTX nr result

ID: Atractylodes22_contig00053654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053654
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN84170.1| hypothetical protein VITISV_028525 [Vitis vinifera]   151   5e-35
ref|XP_002265239.2| PREDICTED: DNA2-like helicase-like [Vitis vi...   149   2e-34
emb|CBI16750.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002321254.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_004134360.1| PREDICTED: DNA replication ATP-dependent hel...   140   1e-31

>emb|CAN84170.1| hypothetical protein VITISV_028525 [Vitis vinifera]
          Length = 705

 Score =  151 bits (382), Expect = 5e-35
 Identities = 81/144 (56%), Positives = 101/144 (70%), Gaps = 1/144 (0%)
 Frame = -2

Query: 430 SNQVPQKNFGQANRFVYRFMRQDLSQPHRRVHDGDDL-NPSSSGNDLECSLKTGDYVILS 254
           SN  PQKN  + N+F+YRF+RQ++   H + H+ D L + SS  NDL+C+L+ GDYVILS
Sbjct: 84  SNXHPQKNSFKDNKFIYRFVRQNVPSFHVKEHNEDSLPSVSSPANDLDCTLRNGDYVILS 143

Query: 253 TDPDRLVVGKGVIMDITRVNVTVSFSKRLRLPGSSPSKIIHDLCQEVWRIDKDEFTASFA 74
           T+   L +  GVI DI+R +V V FSKRLRLP S  S    DL  EV+RI+KDE   SFA
Sbjct: 144 TESGHLALASGVITDISRFHVYVCFSKRLRLPWSKRSSEEQDLLGEVFRIBKDEIVTSFA 203

Query: 73  TMRFNLIQMFLQDERSSHLRSMIV 2
            MRFNLIQ+FLQ  +SSHLR MIV
Sbjct: 204 VMRFNLIQLFLQSMQSSHLRKMIV 227


>ref|XP_002265239.2| PREDICTED: DNA2-like helicase-like [Vitis vinifera]
          Length = 1438

 Score =  149 bits (377), Expect = 2e-34
 Identities = 80/144 (55%), Positives = 101/144 (70%), Gaps = 1/144 (0%)
 Frame = -2

Query: 430  SNQVPQKNFGQANRFVYRFMRQDLSQPHRRVHDGDDL-NPSSSGNDLECSLKTGDYVILS 254
            SN+ PQKN  + N+F+YRF+RQ++   H + H+ D L + SS  NDL+C+L+ GDYVILS
Sbjct: 848  SNKHPQKNSFKDNKFIYRFVRQNVPSFHVKEHNEDSLPSVSSPANDLDCTLRNGDYVILS 907

Query: 253  TDPDRLVVGKGVIMDITRVNVTVSFSKRLRLPGSSPSKIIHDLCQEVWRIDKDEFTASFA 74
            T+   L +  GVI DI+R +V V FSKRLRLP S  S    DL  EV+RI+KDE   SFA
Sbjct: 908  TESGHLALASGVITDISRFHVYVCFSKRLRLPWSKRSSEEQDLLGEVFRINKDEIVTSFA 967

Query: 73   TMRFNLIQMFLQDERSSHLRSMIV 2
             MRFNLIQ+FLQ  + SHLR MIV
Sbjct: 968  VMRFNLIQLFLQSMQGSHLRKMIV 991


>emb|CBI16750.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  149 bits (377), Expect = 2e-34
 Identities = 80/144 (55%), Positives = 101/144 (70%), Gaps = 1/144 (0%)
 Frame = -2

Query: 430 SNQVPQKNFGQANRFVYRFMRQDLSQPHRRVHDGDDL-NPSSSGNDLECSLKTGDYVILS 254
           SN+ PQKN  + N+F+YRF+RQ++   H + H+ D L + SS  NDL+C+L+ GDYVILS
Sbjct: 106 SNKHPQKNSFKDNKFIYRFVRQNVPSFHVKEHNEDSLPSVSSPANDLDCTLRNGDYVILS 165

Query: 253 TDPDRLVVGKGVIMDITRVNVTVSFSKRLRLPGSSPSKIIHDLCQEVWRIDKDEFTASFA 74
           T+   L +  GVI DI+R +V V FSKRLRLP S  S    DL  EV+RI+KDE   SFA
Sbjct: 166 TESGHLALASGVITDISRFHVYVCFSKRLRLPWSKRSSEEQDLLGEVFRINKDEIVTSFA 225

Query: 73  TMRFNLIQMFLQDERSSHLRSMIV 2
            MRFNLIQ+FLQ  + SHLR MIV
Sbjct: 226 VMRFNLIQLFLQSMQGSHLRKMIV 249


>ref|XP_002321254.1| predicted protein [Populus trichocarpa] gi|222862027|gb|EEE99569.1|
            predicted protein [Populus trichocarpa]
          Length = 1152

 Score =  145 bits (367), Expect = 3e-33
 Identities = 76/144 (52%), Positives = 100/144 (69%), Gaps = 1/144 (0%)
 Frame = -2

Query: 430  SNQVPQKNFGQANRFVYRFMRQDLSQPHRRVHDGDDLN-PSSSGNDLECSLKTGDYVILS 254
            S++VP +   + NRF+YRF+ + +         G+ L+ PSSS  D + +LK+GDYVI+S
Sbjct: 575  SDRVPYQKSLKDNRFIYRFVHKKMPLHDVHASGGESLSFPSSSAEDFDYTLKSGDYVIIS 634

Query: 253  TDPDRLVVGKGVIMDITRVNVTVSFSKRLRLPGSSPSKIIHDLCQEVWRIDKDEFTASFA 74
            T   R  V  G I DI+R +V+VSF K LRLPGS+ S   HDL +EVW+IDKDEF  SF+
Sbjct: 635  TKFGRQTVASGFITDISRSHVSVSFPKHLRLPGSNSSSEAHDLFREVWQIDKDEFMTSFS 694

Query: 73   TMRFNLIQMFLQDERSSHLRSMIV 2
             MRFNL+Q+FLQ E+SSHLR MIV
Sbjct: 695  VMRFNLVQLFLQSEQSSHLRKMIV 718


>ref|XP_004134360.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like
            [Cucumis sativus] gi|449518346|ref|XP_004166203.1|
            PREDICTED: DNA replication ATP-dependent
            helicase/nuclease DNA2-like [Cucumis sativus]
          Length = 1379

 Score =  140 bits (352), Expect = 1e-31
 Identities = 72/139 (51%), Positives = 96/139 (69%)
 Frame = -2

Query: 418  PQKNFGQANRFVYRFMRQDLSQPHRRVHDGDDLNPSSSGNDLECSLKTGDYVILSTDPDR 239
            P   F + NR  Y F+RQD           +D + ++S ND++ SL+ GDYVILSTD   
Sbjct: 805  PHCTFEKDNRISYCFVRQD---------SNNDSSNTASINDMDSSLRVGDYVILSTDSGH 855

Query: 238  LVVGKGVIMDITRVNVTVSFSKRLRLPGSSPSKIIHDLCQEVWRIDKDEFTASFATMRFN 59
            L +  G+I D++ V+V+VSFSKRLRLPGS+ S    DL ++VWRIDKDEF  SFA MRFN
Sbjct: 856  LTLASGIITDLSSVHVSVSFSKRLRLPGSTSSTEARDLMKQVWRIDKDEFMTSFAVMRFN 915

Query: 58   LIQMFLQDERSSHLRSMIV 2
            L+Q+FLQ E+++HLR +IV
Sbjct: 916  LVQLFLQGEQNAHLRKLIV 934


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