BLASTX nr result

ID: Atractylodes22_contig00053537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053537
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat...   179   2e-43
emb|CBI21281.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...   174   9e-42
ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat...   171   7e-41
gb|AAU90328.2| Pentatricopeptide repeat domain containing protei...   167   1e-39

>ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/121 (71%), Positives = 103/121 (85%)
 Frame = -3

Query: 364 FEEMPCRNIVSWNAMISAYAQDGDGEATLKTFDELIKSGLQPDSVSFLSVLTACSHRGLV 185
           F+EMP RNIVSWNAMISAYAQ+G+ EATLK+F E++ SGLQPDSVSFL VL+ACSH GLV
Sbjct: 510 FQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLV 569

Query: 184 EEGLAHFKSMTQRHRIVVKREHYASMVDLLCRCGQFGEADKLMHEMPFDPDEYMLSSVLR 5
           EEGL HF SMTQ +++  +REHYAS+VD+LCR G+F EA+KLM EMP DPDE M SSVL 
Sbjct: 570 EEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLN 629

Query: 4   S 2
           +
Sbjct: 630 A 630


>emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/121 (71%), Positives = 103/121 (85%)
 Frame = -3

Query: 364 FEEMPCRNIVSWNAMISAYAQDGDGEATLKTFDELIKSGLQPDSVSFLSVLTACSHRGLV 185
           F+EMP RNIVSWNAMISAYAQ+G+ EATLK+F E++ SGLQPDSVSFL VL+ACSH GLV
Sbjct: 470 FQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLV 529

Query: 184 EEGLAHFKSMTQRHRIVVKREHYASMVDLLCRCGQFGEADKLMHEMPFDPDEYMLSSVLR 5
           EEGL HF SMTQ +++  +REHYAS+VD+LCR G+F EA+KLM EMP DPDE M SSVL 
Sbjct: 530 EEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLN 589

Query: 4   S 2
           +
Sbjct: 590 A 590


>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499507|gb|AES80710.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  174 bits (440), Expect = 9e-42
 Identities = 81/121 (66%), Positives = 103/121 (85%)
 Frame = -3

Query: 364 FEEMPCRNIVSWNAMISAYAQDGDGEATLKTFDELIKSGLQPDSVSFLSVLTACSHRGLV 185
           F+EMP RN VSWNA+ISAYAQ+GDG+ TL+ F+E+++SGLQPDSVS LS+L ACSH GLV
Sbjct: 559 FQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLV 618

Query: 184 EEGLAHFKSMTQRHRIVVKREHYASMVDLLCRCGQFGEADKLMHEMPFDPDEYMLSSVLR 5
           EEGL +F SMT+ +++V K+EHYAS +D+LCR G+F EA+KLM +MPF+PDE M SSVL 
Sbjct: 619 EEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLN 678

Query: 4   S 2
           S
Sbjct: 679 S 679


>ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/121 (66%), Positives = 101/121 (83%)
 Frame = -3

Query: 364 FEEMPCRNIVSWNAMISAYAQDGDGEATLKTFDELIKSGLQPDSVSFLSVLTACSHRGLV 185
           F+EMP RN VSWNA+ISAYAQ+GDG   L++F+++I SGLQP+SVSFLS+L ACSH GLV
Sbjct: 500 FQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLV 559

Query: 184 EEGLAHFKSMTQRHRIVVKREHYASMVDLLCRCGQFGEADKLMHEMPFDPDEYMLSSVLR 5
           EEGL +F SMTQ +++  +REHYASMVD+LCR G+F EA+KLM  MPF+PDE M SS+L 
Sbjct: 560 EEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILN 619

Query: 4   S 2
           S
Sbjct: 620 S 620


>gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/121 (65%), Positives = 101/121 (83%)
 Frame = -3

Query: 364 FEEMPCRNIVSWNAMISAYAQDGDGEATLKTFDELIKSGLQPDSVSFLSVLTACSHRGLV 185
           F+EMP RNIV WNA+ISAY+Q+GD EAT  +F ++I+SGL PDSVSFLSVLTACSHRGLV
Sbjct: 504 FKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLV 563

Query: 184 EEGLAHFKSMTQRHRIVVKREHYASMVDLLCRCGQFGEADKLMHEMPFDPDEYMLSSVLR 5
           E+ L +F SMTQ +++  +R+HYA+M+D+LCR G+F EA+ L+ EMPF+PDE M SSVL 
Sbjct: 564 EKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLN 623

Query: 4   S 2
           S
Sbjct: 624 S 624


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