BLASTX nr result

ID: Atractylodes22_contig00053521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053521
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP43505.2| katanin-like protein [Gossypium hirsutum]              117   1e-24
gb|AAP83637.1| katanin [Gossypium hirsutum]                           117   1e-24
gb|AAP83638.1| katanin [Gossypium barbadense]                         117   1e-24
ref|XP_002517537.1| Katanin p60 ATPase-containing subunit, putat...   110   9e-23
ref|XP_002284961.1| PREDICTED: katanin p60 ATPase-containing sub...   109   2e-22

>gb|AAP43505.2| katanin-like protein [Gossypium hirsutum]
          Length = 520

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = +3

Query: 51  MAGTSLAGLQDHLKLAREYALEGLYDTSVIFFDGAIAQINKHLNSLDDPLVRSKWMNVKK 230
           M G SLAGLQDHLKLAREYALEGLYDTS+IFFDGAIAQINKHLN+LDDPL+RSKWMNVKK
Sbjct: 1   MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60


>gb|AAP83637.1| katanin [Gossypium hirsutum]
          Length = 520

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = +3

Query: 51  MAGTSLAGLQDHLKLAREYALEGLYDTSVIFFDGAIAQINKHLNSLDDPLVRSKWMNVKK 230
           M G SLAGLQDHLKLAREYALEGLYDTS+IFFDGAIAQINKHLN+LDDPL+RSKWMNVKK
Sbjct: 1   MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60


>gb|AAP83638.1| katanin [Gossypium barbadense]
          Length = 521

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/60 (91%), Positives = 58/60 (96%)
 Frame = +3

Query: 51  MAGTSLAGLQDHLKLAREYALEGLYDTSVIFFDGAIAQINKHLNSLDDPLVRSKWMNVKK 230
           M G SLAGLQDHLKLAREYALEGLYDTS+IFFDGAIAQINKHLN+LDDPL+RSKWMNVKK
Sbjct: 1   MVGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKK 60


>ref|XP_002517537.1| Katanin p60 ATPase-containing subunit, putative [Ricinus communis]
           gi|223543169|gb|EEF44701.1| Katanin p60
           ATPase-containing subunit, putative [Ricinus communis]
          Length = 523

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/56 (91%), Positives = 56/56 (100%)
 Frame = +3

Query: 63  SLAGLQDHLKLAREYALEGLYDTSVIFFDGAIAQINKHLNSLDDPLVRSKWMNVKK 230
           SL+GLQDHLKLAREYALEGLYDTS+IFFDGAIAQINKHLN+LDDPL+R+KWMNVKK
Sbjct: 2   SLSGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRTKWMNVKK 57


>ref|XP_002284961.1| PREDICTED: katanin p60 ATPase-containing subunit [Vitis vinifera]
           gi|297743333|emb|CBI36200.3| unnamed protein product
           [Vitis vinifera]
          Length = 521

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/57 (87%), Positives = 56/57 (98%)
 Frame = +3

Query: 60  TSLAGLQDHLKLAREYALEGLYDTSVIFFDGAIAQINKHLNSLDDPLVRSKWMNVKK 230
           ++L GLQDHLKLAREYALEGLYDTS+IFFDGAIAQINKHLN+LDDPL+R+KWMNVKK
Sbjct: 5   STLVGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRTKWMNVKK 61


Top