BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053513
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop...    59   5e-07
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...    58   7e-07
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...    57   2e-06
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...    57   2e-06
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...    56   3e-06

>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1137

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = -1

Query: 176 GFEFCSD*FNEYCKSFGIVTHKTATYTPQKNGLAE*FNRKFLVSVASHLE**NIKQRF 3
           G EFC+  F+E CK  GIV H+T TYTPQ+NG+AE  NR  +  V S L    + ++F
Sbjct: 363 GLEFCNHKFDEVCKKEGIVRHRTCTYTPQQNGVAERLNRTIMNKVRSMLSESGLDKKF 420


>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/58 (46%), Positives = 36/58 (62%)
 Frame = -1

Query: 176 GFEFCSD*FNEYCKSFGIVTHKTATYTPQKNGLAE*FNRKFLVSVASHLE**NIKQRF 3
           G EFC+  F+ YCK +GI  HKT TYTPQ+NG+AE  NR  +  V   L    +++ F
Sbjct: 251 GLEFCNIKFDSYCKKYGIERHKTCTYTPQQNGVAERMNRTVMEKVRCLLNESGLEEEF 308


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = -1

Query: 176 GFEFCSD*FNEYCKSFGIVTHKTATYTPQKNGLAE*FNRKFLVSVASHLE**NIKQRF 3
           G E+C+  F ++CK  GIV HKT  YTPQ+NG+AE  NR  +  V S L    ++++F
Sbjct: 545 GLEYCNHYFEKFCKEEGIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKF 602


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1156

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%)
 Frame = -1

Query: 176 GFEFCSD*FNEYCKSFGIVTHKTATYTPQKNGLAE*FNRKFLVSVASHLE**NIKQRF 3
           G EFCSD F++YC+  GIV H T  YTPQ+NG+AE  NR  + +    L    + +RF
Sbjct: 496 GGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISNTRCMLSNARMNKRF 553


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = -1

Query: 176 GFEFCSD*FNEYCKSFGIVTHKTATYTPQKNGLAE*FNRKFLVSV 42
           G EFC+  F+ YCK  GI  H+T TYTPQ+NG+AE  NR  +  V
Sbjct: 568 GLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKV 612