BLASTX nr result

ID: Atractylodes22_contig00053460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053460
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]   147   9e-34
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]   145   3e-33
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...   144   1e-32
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   143   2e-32
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...   141   5e-32

>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
          Length = 1288

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/107 (63%), Positives = 83/107 (77%)
 Frame = +3

Query: 3    LRYIKQQPGQGLFLSAQSSTQLRAFCDSDYGMCDDSRRSTTGFCVFVGDSMVSWKSKRQP 182
            LRY+K  PG GLF  + S  +L A+ DSD+  C DSRRS TGFCVF+G+S+VSWKSK+Q 
Sbjct: 1109 LRYLKGNPGMGLFFPSNSELRLMAYTDSDWARCPDSRRSVTGFCVFLGNSLVSWKSKKQH 1168

Query: 183  VVSRSSAEAEYRAMAVATCELVWLQQLLSDFGVISTAPTLLFCDNES 323
            +VSRSSAEAEYRAMA  +CE+ WL  LL DFG+  +AP LLFCDN+S
Sbjct: 1169 IVSRSSAEAEYRAMANTSCEITWLLALLKDFGIDHSAPALLFCDNQS 1215


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/107 (63%), Positives = 82/107 (76%)
 Frame = +3

Query: 3    LRYIKQQPGQGLFLSAQSSTQLRAFCDSDYGMCDDSRRSTTGFCVFVGDSMVSWKSKRQP 182
            L+YIK  PG+G+F SA SS QL+AF DSD+  C DSR+S TGFC+F+GDS++SWKSK+Q 
Sbjct: 833  LQYIKGSPGKGIFFSASSSLQLKAFSDSDWAACPDSRKSVTGFCIFLGDSLISWKSKKQR 892

Query: 183  VVSRSSAEAEYRAMAVATCELVWLQQLLSDFGVISTAPTLLFCDNES 323
             VSRSSAEAEYRAMA  TCEL W   LL D GV  T   LL+CDN++
Sbjct: 893  TVSRSSAEAEYRAMAHVTCELTWFISLLKDLGVPHTQLALLYCDNQA 939


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
            gi|7267797|emb|CAB81200.1| putative retrotransposon
            polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/107 (60%), Positives = 81/107 (75%)
 Frame = +3

Query: 3    LRYIKQQPGQGLFLSAQSSTQLRAFCDSDYGMCDDSRRSTTGFCVFVGDSMVSWKSKRQP 182
            LRY+K  PGQGL  SA S   L  F D+D+G C DSRRS TGFC+++G S+++WKSK+Q 
Sbjct: 860  LRYLKGNPGQGLMYSASSELCLNGFSDADWGTCKDSRRSVTGFCIYLGTSLITWKSKKQS 919

Query: 183  VVSRSSAEAEYRAMAVATCELVWLQQLLSDFGVISTAPTLLFCDNES 323
            VVSRSS E+EYR++A ATCE++WLQQLL D  V  T P  LFCDN+S
Sbjct: 920  VVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKS 966


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/107 (61%), Positives = 83/107 (77%)
 Frame = +3

Query: 3    LRYIKQQPGQGLFLSAQSSTQLRAFCDSDYGMCDDSRRSTTGFCVFVGDSMVSWKSKRQP 182
            +RY+K  PGQGLF S+ S  +LRA+CDSD+  C  +RRSTTG+CVF+G S+VSW+SKRQ 
Sbjct: 1340 VRYLKNAPGQGLFFSSNSDFRLRAYCDSDWAGCPITRRSTTGYCVFLGPSLVSWRSKRQK 1399

Query: 183  VVSRSSAEAEYRAMAVATCELVWLQQLLSDFGVISTAPTLLFCDNES 323
             VS SSAEAEYRAM  A CEL WL+ LL D GV+   P+LL+CDN++
Sbjct: 1400 TVSLSSAEAEYRAMTGACCELTWLRYLLRDLGVLHREPSLLYCDNKA 1446


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score =  141 bits (356), Expect = 5e-32
 Identities = 63/107 (58%), Positives = 84/107 (78%)
 Frame = +3

Query: 3    LRYIKQQPGQGLFLSAQSSTQLRAFCDSDYGMCDDSRRSTTGFCVFVGDSMVSWKSKRQP 182
            L+Y+K  PGQG+ +    S  L+AF D+D+G C D+RRS TGFC+F+GDS++SWKSK+QP
Sbjct: 1122 LKYLKGSPGQGVLIKPIDSFHLKAFVDADWGSCLDTRRSVTGFCIFLGDSIISWKSKKQP 1181

Query: 183  VVSRSSAEAEYRAMAVATCELVWLQQLLSDFGVISTAPTLLFCDNES 323
             VSRSSAEAEYRA+A  T ELVW+ QLL+DF + +  PT +FCDN++
Sbjct: 1182 TVSRSSAEAEYRALASVTSELVWITQLLTDFKIKTLMPTTVFCDNQA 1228


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