BLASTX nr result

ID: Atractylodes22_contig00053420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053420
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi...   203   1e-50
ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor ...   202   3e-50
ref|XP_002280762.1| PREDICTED: DDB1- and CUL4-associated factor ...   200   1e-49
emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]   200   1e-49
ref|XP_002312940.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49

>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
           gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 482

 Score =  203 bits (516), Expect = 1e-50
 Identities = 95/149 (63%), Positives = 119/149 (79%), Gaps = 3/149 (2%)
 Frame = +2

Query: 8   RSFVGVVNLNSIAIDPRNPNLFVIAGSDEFTRLYDIRQYRWDGSADFGKPVDHFCPRHLI 187
           R ++ VV+LN+I IDPRNPNLF +AGSDE+TRLYDIR Y+WDGS +FG+P D+FCP HLI
Sbjct: 190 REYMPVVHLNAITIDPRNPNLFAVAGSDEYTRLYDIRMYKWDGSTEFGQPTDYFCPPHLI 249

Query: 188 GDENLGITGLAFSDQSELLVSYCDEFIYLFSKDMGLGSD---VNAILDSRATGFDSEMET 358
           GDE +GITGL+FSDQSELLVSY DE IYLF++DMGLG +    + +    + G  + M+ 
Sbjct: 250 GDERVGITGLSFSDQSELLVSYNDELIYLFTRDMGLGPNPDPSSPVSIGSSAGELACMDV 309

Query: 359 DGEGGPQVYKGHRNCVTVKGVNFFGPKCE 445
           DG+  PQVY+GH+NC TVKGV+FFGP CE
Sbjct: 310 DGKVSPQVYEGHQNCETVKGVSFFGPGCE 338


>ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max]
          Length = 497

 Score =  202 bits (513), Expect = 3e-50
 Identities = 99/159 (62%), Positives = 119/159 (74%), Gaps = 14/159 (8%)
 Frame = +2

Query: 11  SFVGVVNLNSIAIDPRNPNLFVIAGSDEFTRLYDIRQYRWDGSADFGKPVDHFCPRHLIG 190
           S++ V++LN+IAIDPRNPNLF +AGSDE+ RLYDIR+Y+WDGS DFG+P D FCP HLIG
Sbjct: 193 SYMPVIHLNAIAIDPRNPNLFAVAGSDEYARLYDIRRYKWDGSTDFGQPTDFFCPPHLIG 252

Query: 191 DENLGITGLAFSDQSELLVSYCDEFIYLFSKDMGL-------GSDVNAILDSRATGF--- 340
           D+ +GITGLAFS+Q ELLVSY DE IYLF++DMGL       GS  +   D+   GF   
Sbjct: 253 DQQVGITGLAFSEQRELLVSYNDELIYLFTQDMGLGPNPPDPGSPKSMNSDASEIGFSHG 312

Query: 341 ----DSEMETDGEGGPQVYKGHRNCVTVKGVNFFGPKCE 445
                S M+ D +  PQV+KGHRNC TVKGVNFFGPKCE
Sbjct: 313 SVSSQSNMDADDKITPQVFKGHRNCETVKGVNFFGPKCE 351


>ref|XP_002280762.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Vitis vinifera]
          Length = 493

 Score =  200 bits (508), Expect = 1e-49
 Identities = 99/152 (65%), Positives = 115/152 (75%), Gaps = 6/152 (3%)
 Frame = +2

Query: 8   RSFVGVVNLNSIAIDPRNPNLFVIAGSDEFTRLYDIRQYRWDGSADFGKPVDHFCPRHLI 187
           R    VV LN+IAIDPRN NLF +AGSDE+ RLYDIR+Y+WDGS DF +P+D FCP HLI
Sbjct: 192 RGLRAVVQLNAIAIDPRNSNLFAVAGSDEYARLYDIRKYKWDGSTDFDQPIDFFCPSHLI 251

Query: 188 GDENLGITGLAFSDQSELLVSYCDEFIYLFSKDMGLGSD-VNAILDSRATGFD-----SE 349
           G+  +GITGL+FSDQ ELLVSY DEFIYLF+KD+GLG D + A   S  +G D     S 
Sbjct: 252 GNPYVGITGLSFSDQRELLVSYNDEFIYLFTKDIGLGPDPIPASPASLGSGADHPLEAST 311

Query: 350 METDGEGGPQVYKGHRNCVTVKGVNFFGPKCE 445
           M+TD    PQVYKGH+NC TVKGV FFGPKCE
Sbjct: 312 MDTDDNVSPQVYKGHKNCKTVKGVGFFGPKCE 343


>emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]
          Length = 1464

 Score =  200 bits (508), Expect = 1e-49
 Identities = 99/152 (65%), Positives = 115/152 (75%), Gaps = 6/152 (3%)
 Frame = +2

Query: 8    RSFVGVVNLNSIAIDPRNPNLFVIAGSDEFTRLYDIRQYRWDGSADFGKPVDHFCPRHLI 187
            R    VV LN+IAIDPRN NLF +AGSDE+ RLYDIR+Y+WDGS DF +P+D FCP HLI
Sbjct: 1051 RGLRAVVQLNAIAIDPRNSNLFAVAGSDEYARLYDIRKYKWDGSTDFDQPIDFFCPSHLI 1110

Query: 188  GDENLGITGLAFSDQSELLVSYCDEFIYLFSKDMGLGSD-VNAILDSRATGFD-----SE 349
            G+  +GITGL+FSDQ ELLVSY DEFIYLF+KD+GLG D + A   S  +G D     S 
Sbjct: 1111 GNPYVGITGLSFSDQRELLVSYNDEFIYLFTKDIGLGPDPIPASPASLGSGADHPLEAST 1170

Query: 350  METDGEGGPQVYKGHRNCVTVKGVNFFGPKCE 445
            M+TD    PQVYKGH+NC TVKGV FFGPKCE
Sbjct: 1171 MDTDXNVSPQVYKGHKNCKTVKGVGFFGPKCE 1202


>ref|XP_002312940.1| predicted protein [Populus trichocarpa] gi|222849348|gb|EEE86895.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  198 bits (504), Expect = 3e-49
 Identities = 96/160 (60%), Positives = 118/160 (73%), Gaps = 14/160 (8%)
 Frame = +2

Query: 8   RSFVGVVNLNSIAIDPRNPNLFVIAGSDEFTRLYDIRQYRWDGSADFGKPVDHFCPRHLI 187
           RSF   V+LN+IAIDPRNPNLF + G DEF RLYDIR+Y WDGS+DFG+P D+FCP+HLI
Sbjct: 192 RSFQPYVHLNAIAIDPRNPNLFAVGGMDEFARLYDIRKYSWDGSSDFGQPADYFCPQHLI 251

Query: 188 GDENLGITGLAFSDQSELLVSYCDEFIYLFSKDMGL--------------GSDVNAILDS 325
           G+ + GITGL+FSDQSELLVSY +EFIYLF++DMGL              GSD + + + 
Sbjct: 252 GNGDTGITGLSFSDQSELLVSYNNEFIYLFTRDMGLGNPPFPSFSSPISMGSDTSEV-EP 310

Query: 326 RATGFDSEMETDGEGGPQVYKGHRNCVTVKGVNFFGPKCE 445
            +    S M+ DG+   Q YKGHRNC TVKGV+FFGP+CE
Sbjct: 311 GSIASSSSMDVDGKNAAQAYKGHRNCETVKGVSFFGPRCE 350


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