BLASTX nr result

ID: Atractylodes22_contig00053396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053396
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001043474.1| Os01g0596000 [Oryza sativa Japonica Group] g...    56   4e-06
gb|EAZ12559.1| hypothetical protein OsJ_02466 [Oryza sativa Japo...    56   4e-06
gb|AAX96381.1| F-box domain, putative [Oryza sativa Japonica Gro...    55   5e-06
ref|NP_197379.1| F-box domain-containing protein [Arabidopsis th...    55   5e-06
ref|XP_003607672.1| F-box family-10 [Medicago truncatula] gi|355...    55   5e-06

>ref|NP_001043474.1| Os01g0596000 [Oryza sativa Japonica Group]
           gi|53792273|dbj|BAD52906.1| ribosomal RNA apurinic site
           specific lyase-like [Oryza sativa Japonica Group]
           gi|53793450|dbj|BAD53173.1| ribosomal RNA apurinic site
           specific lyase-like [Oryza sativa Japonica Group]
           gi|113533005|dbj|BAF05388.1| Os01g0596000 [Oryza sativa
           Japonica Group] gi|125526680|gb|EAY74794.1| hypothetical
           protein OsI_02689 [Oryza sativa Indica Group]
          Length = 503

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = -1

Query: 148 SSDEIKGGGDDIISGLPATLLIHILSLLPEADATRTSILSNRWKNLW 8
           SS    GGG+D IS LP  LL HI+S LP  DA RT+ LS+RW+ +W
Sbjct: 31  SSSSAGGGGEDRISALPDDLLRHIVSRLPTKDAARTTALSSRWRGIW 77


>gb|EAZ12559.1| hypothetical protein OsJ_02466 [Oryza sativa Japonica Group]
          Length = 503

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = -1

Query: 148 SSDEIKGGGDDIISGLPATLLIHILSLLPEADATRTSILSNRWKNLW 8
           SS    GGG+D IS LP  LL HI+S LP  DA RT+ LS+RW+ +W
Sbjct: 31  SSSSAGGGGEDRISALPDDLLRHIVSRLPTKDAARTTALSSRWRGIW 77


>gb|AAX96381.1| F-box domain, putative [Oryza sativa Japonica Group]
           gi|77549116|gb|ABA91913.1| F-box domain containing
           protein [Oryza sativa Japonica Group]
          Length = 420

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/53 (45%), Positives = 36/53 (67%)
 Frame = -1

Query: 166 SKRQKRSSDEIKGGGDDIISGLPATLLIHILSLLPEADATRTSILSNRWKNLW 8
           +KR +R  D   GGG+D +  LP  +L H+LS LP  DA +T +L++RW++LW
Sbjct: 4   AKRGRRMMDLDGGGGEDRVGALPDEVLHHMLSFLPARDAVQTCVLAHRWRDLW 56


>ref|NP_197379.1| F-box domain-containing protein [Arabidopsis thaliana]
           gi|334187755|ref|NP_001190332.1| F-box domain-containing
           protein [Arabidopsis thaliana]
           gi|357528794|sp|Q56YH2.2|FBD41_ARATH RecName:
           Full=FBD-associated F-box protein At5g18780
           gi|332005227|gb|AED92610.1| F-box domain-containing
           protein [Arabidopsis thaliana]
           gi|332005228|gb|AED92611.1| F-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 441

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = -1

Query: 136 IKGGGDDIISGLPATLLIHILSLLPEADATRTSILSNRWKNLWMF 2
           ++G G+D IS LP  LL HILS L   D+ RTS+LS+RW++LW++
Sbjct: 5   VRGSGEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLW 49


>ref|XP_003607672.1| F-box family-10 [Medicago truncatula] gi|355508727|gb|AES89869.1|
           F-box family-10 [Medicago truncatula]
          Length = 388

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/42 (61%), Positives = 30/42 (71%)
 Frame = -1

Query: 130 GGGDDIISGLPATLLIHILSLLPEADATRTSILSNRWKNLWM 5
           G G D IS LP  +L HILSLLP  DA  TSIL+ RWK+LW+
Sbjct: 13  GDGKDFISNLPDEILHHILSLLPAKDAVGTSILARRWKSLWI 54


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