BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053340
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   156   2e-36
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   155   3e-36
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     154   7e-36
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   153   1e-35
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...   152   4e-35

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/101 (72%), Positives = 85/101 (84%)
 Frame = -3

Query: 303 LIGLSQSMYIDKVLKRFRMDESKKGFIPMQHGLTLSKAQSPSSPEELEEMRNVPYASAVG 124
           +IGLSQ  YIDKVL RF M +SKKGFIPM HG+TLSK Q PS+ +E E M  +PYASA+G
Sbjct: 687 IIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIG 746

Query: 123 SIMYAMLCTRPDVSCALSMTSRYQSNPGKAHWIAVKNILKY 1
           SIMYAML TRPDV+CALSMTSRYQS+PG++HWI V+NI KY
Sbjct: 747 SIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKY 787


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/101 (73%), Positives = 85/101 (84%)
 Frame = -3

Query: 303  LIGLSQSMYIDKVLKRFRMDESKKGFIPMQHGLTLSKAQSPSSPEELEEMRNVPYASAVG 124
            LIGLSQS YIDKVLKRF M +SKKGF+PM HG+ L K Q P + +E  +M  +PYASA+G
Sbjct: 911  LIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIG 970

Query: 123  SIMYAMLCTRPDVSCALSMTSRYQSNPGKAHWIAVKNILKY 1
            SIMYAMLCTRPDVS ALS TSRYQS+PG++HWIAVKNILKY
Sbjct: 971  SIMYAMLCTRPDVSYALSATSRYQSDPGESHWIAVKNILKY 1011


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/101 (74%), Positives = 84/101 (83%)
 Frame = -3

Query: 303  LIGLSQSMYIDKVLKRFRMDESKKGFIPMQHGLTLSKAQSPSSPEELEEMRNVPYASAVG 124
            LIGLSQS YIDKVLKRF M +SKKGF+PM HG+ LSK Q P + +E  +M  VPYASA+G
Sbjct: 1040 LIGLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIG 1099

Query: 123  SIMYAMLCTRPDVSCALSMTSRYQSNPGKAHWIAVKNILKY 1
            SIMYAMLCTRPDVS ALS TSRYQS+PG+ HW AVKNILKY
Sbjct: 1100 SIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKY 1140


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  153 bits (387), Expect = 1e-35
 Identities = 73/101 (72%), Positives = 84/101 (83%)
 Frame = -3

Query: 303  LIGLSQSMYIDKVLKRFRMDESKKGFIPMQHGLTLSKAQSPSSPEELEEMRNVPYASAVG 124
            LIGLSQS YIDKVLKRF M +SKKGF+PM HG+ L K Q P + +E  +M  +PYASA+G
Sbjct: 774  LIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIG 833

Query: 123  SIMYAMLCTRPDVSCALSMTSRYQSNPGKAHWIAVKNILKY 1
            SIMYAMLCT PDVS ALS TSRYQS+PG++HWIAVKNILKY
Sbjct: 834  SIMYAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKY 874


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77550379|gb|ABA93176.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 938

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/101 (71%), Positives = 84/101 (83%)
 Frame = -3

Query: 303  LIGLSQSMYIDKVLKRFRMDESKKGFIPMQHGLTLSKAQSPSSPEELEEMRNVPYASAVG 124
            LIGLSQS YIDKVLKRF M +SKKGF+PM HG+ L K Q P +  E  +M  +PYASA+G
Sbjct: 759  LIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTNERNKMSVIPYASAIG 818

Query: 123  SIMYAMLCTRPDVSCALSMTSRYQSNPGKAHWIAVKNILKY 1
            SIMYAMLCTRPDVS ALS TS+YQS+PG++HWIA+KNILKY
Sbjct: 819  SIMYAMLCTRPDVSYALSATSQYQSDPGESHWIALKNILKY 859