BLASTX nr result

ID: Atractylodes22_contig00053318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053318
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   192   2e-47
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   190   9e-47
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]   179   3e-43
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   151   6e-35
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...   150   1e-34

>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  192 bits (488), Expect = 2e-47
 Identities = 85/107 (79%), Positives = 93/107 (86%)
 Frame = +2

Query: 2    RVKFGSGKHATKEILEYVHSDLWGPSPVKSRGGCSYFVTFIDDYSRKVWLYFLKTKDEVF 181
            RVKF  G H T  +LEY+HSDLWGPSPV+S  GC Y+VTFIDD+SRKVW+YFLK KDEVF
Sbjct: 790  RVKFSMGSHTTNGVLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVF 849

Query: 182  GKFKEWKTMVEKRTGKQVKTLRTDNGLEFCNAPFDDFCKNEGIVRHR 322
            GKFKEWKTMVEKRTGK VKTLRTDNGLEFCN  FD+FC+ EGIVRHR
Sbjct: 850  GKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHR 896


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  190 bits (483), Expect = 9e-47
 Identities = 84/106 (79%), Positives = 92/106 (86%)
 Frame = +2

Query: 5   VKFGSGKHATKEILEYVHSDLWGPSPVKSRGGCSYFVTFIDDYSRKVWLYFLKTKDEVFG 184
           VKF  G H T  +LEY+HSDLWGPSPV+S  GC Y+VTFIDD+SRKVW+YFLK KDEVFG
Sbjct: 578 VKFSMGSHTTNGVLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFG 637

Query: 185 KFKEWKTMVEKRTGKQVKTLRTDNGLEFCNAPFDDFCKNEGIVRHR 322
           KFKEWKTMVEKRTGK VKTLRTDNGLEFCN  FD+FC+ EGIVRHR
Sbjct: 638 KFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHR 683


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score =  179 bits (453), Expect = 3e-43
 Identities = 79/94 (84%), Positives = 86/94 (91%)
 Frame = +2

Query: 41  ILEYVHSDLWGPSPVKSRGGCSYFVTFIDDYSRKVWLYFLKTKDEVFGKFKEWKTMVEKR 220
           ILEY+HSDLWGPSPV+S  GC Y+VTFIDD+SRKVW+YFLK KDEVFGKFKEWKTMVEKR
Sbjct: 445 ILEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKR 504

Query: 221 TGKQVKTLRTDNGLEFCNAPFDDFCKNEGIVRHR 322
           TGK VKTLRTDNGLEFCN  FD+FC+ EGIVRHR
Sbjct: 505 TGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHR 538


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  151 bits (381), Expect = 6e-35
 Identities = 68/106 (64%), Positives = 80/106 (75%)
 Frame = +2

Query: 2   RVKFGSGKHATKEILEYVHSDLWGPSPVKSRGGCSYFVTFIDDYSRKVWLYFLKTKDEVF 181
           RVKF +  H TK IL+YVH+DLWGPS   S GG  Y +T IDDYSRKVW YFLK KD+ F
Sbjct: 471 RVKFNTSVHRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTF 530

Query: 182 GKFKEWKTMVEKRTGKQVKTLRTDNGLEFCNAPFDDFCKNEGIVRH 319
             FKEWK M+E++T K+VK LRTDN  EFC+  FDD+C+ EGIVRH
Sbjct: 531 AAFKEWKVMIERQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRH 576


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1156

 Score =  150 bits (378), Expect = 1e-34
 Identities = 67/106 (63%), Positives = 81/106 (76%)
 Frame = +2

Query: 2   RVKFGSGKHATKEILEYVHSDLWGPSPVKSRGGCSYFVTFIDDYSRKVWLYFLKTKDEVF 181
           RVKF +  H +K IL+YVH+DLWGPS   S GG  Y +T IDDYSRKVW YFLK KD+ F
Sbjct: 411 RVKFNTSVHRSKGILDYVHADLWGPSRKPSLGGACYMLTIIDDYSRKVWPYFLKHKDDTF 470

Query: 182 GKFKEWKTMVEKRTGKQVKTLRTDNGLEFCNAPFDDFCKNEGIVRH 319
             FKEWK M+E++T K+VK LRTD+G EFC+  FDD+C+ EGIVRH
Sbjct: 471 AAFKEWKVMIERQTEKEVKVLRTDSGGEFCSDAFDDYCRKEGIVRH 516


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