BLASTX nr result

ID: Atractylodes22_contig00053292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053292
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   150   1e-34
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  143   1e-32
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  143   2e-32
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]         142   4e-32
emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]        140   8e-32

>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  150 bits (379), Expect = 1e-34
 Identities = 75/154 (48%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
 Frame = -3

Query: 465  PLDLAVLDTSSKFNPEASDRAADIKALHQHVHDKITKSNELLKYRRDKGRKHILFQPGDL 286
            P+DL  L +S K N +A +R+  I  +H+   + I + N   K  RDKGRKH++F PGDL
Sbjct: 1467 PIDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMNAKYKLARDKGRKHVVFAPGDL 1526

Query: 285  VWVHFRKDRFPTKRRSKLSPRSDGPFEILAKVNDNAYKVRLPGTPKEAATFNIADIEPYY 106
            VW+H RKDRFP  R+SKL PR+DGPF++L K+NDNAYK+ LP     + TFNIAD++PY 
Sbjct: 1527 VWLHLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFGVSPTFNIADLKPYL 1586

Query: 105  DPDESIPSLRANFVEAGEDDRQ-----TPEDPIV 19
              ++ +PS   +F E GEDD       TP  P V
Sbjct: 1587 GEEDELPSRTTSFQE-GEDDEDINTIVTPTAPTV 1619


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/155 (45%), Positives = 98/155 (63%), Gaps = 5/155 (3%)
 Frame = -3

Query: 465  PLDLAVLDTSSKFNPEASDRAADIKALHQHVHDKITKSNELLKYRRDKGRKHILFQPGDL 286
            P+DL  + +S K N +A +RA  I  +H+   + I + N   K   DKGRKH++F PGDL
Sbjct: 1482 PIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGDL 1541

Query: 285  VWVHFRKDRFPTKRRSKLSPRSDGPFEILAKVNDNAYKVRLPGTPKEAATFNIADIEPYY 106
            VW+H RKDRFP  R+SKL PR+ GPF++L K+NDNAY++ LP     + TFNIAD++PY 
Sbjct: 1542 VWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPADFGVSPTFNIADLKPYL 1601

Query: 105  DPDESIPSLRANFVEAGEDDRQ-----TPEDPIVL 16
              ++ +PS R   V+ GEDD       TP  P  +
Sbjct: 1602 GEEDELPS-RTTSVQEGEDDEDINTIATPTAPAAI 1635


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/155 (45%), Positives = 98/155 (63%), Gaps = 5/155 (3%)
 Frame = -3

Query: 465  PLDLAVLDTSSKFNPEASDRAADIKALHQHVHDKITKSNELLKYRRDKGRKHILFQPGDL 286
            P+DL  + +S K N +A +RA  I  +H+   + I + N   K   DKGRKH++F PGDL
Sbjct: 1479 PIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGDL 1538

Query: 285  VWVHFRKDRFPTKRRSKLSPRSDGPFEILAKVNDNAYKVRLPGTPKEAATFNIADIEPYY 106
            VW+H RKDRFP  R+SKL PR+ GPF++L K+NDNAY++ LP     + TFNIAD++PY 
Sbjct: 1539 VWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPXDFGVSPTFNIADLKPYL 1598

Query: 105  DPDESIPSLRANFVEAGEDDRQ-----TPEDPIVL 16
              ++ +PS R   V+ GEDD       TP  P  +
Sbjct: 1599 GEEDELPS-RTTSVQEGEDDEDINTIATPTAPAAI 1632


>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
          Length = 1170

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/151 (45%), Positives = 95/151 (62%)
 Frame = -3

Query: 465  PLDLAVLDTSSKFNPEASDRAADIKALHQHVHDKITKSNELLKYRRDKGRKHILFQPGDL 286
            P+DL  L TS + N +A  RA  +  LH+   + I + N   K    KG+KH+ F+PGDL
Sbjct: 939  PIDLLPLPTSERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDL 998

Query: 285  VWVHFRKDRFPTKRRSKLSPRSDGPFEILAKVNDNAYKVRLPGTPKEAATFNIADIEPYY 106
            VW+H RKDRFP  R+SKL PR+DGPF++L K+NDNAYK+ LP     + TFNIAD++PY 
Sbjct: 999  VWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGVSPTFNIADLKPYL 1058

Query: 105  DPDESIPSLRANFVEAGEDDRQTPEDPIVLP 13
              ++ + S R   ++ GEDD   P +    P
Sbjct: 1059 GEEDELES-RTTQMQEGEDDEDIPSNDTTTP 1088


>emb|CAD39843.2| OSJNBb0072N21.12 [Oryza sativa Japonica Group]
          Length = 1239

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/151 (45%), Positives = 95/151 (62%)
 Frame = -3

Query: 465  PLDLAVLDTSSKFNPEASDRAADIKALHQHVHDKITKSNELLKYRRDKGRKHILFQPGDL 286
            P+DL  L TS + N +A  RA  +  LH+   + I + N   K    KG+KH+ F+PG+L
Sbjct: 1044 PIDLLPLPTSERVNFDAKHRAELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGNL 1103

Query: 285  VWVHFRKDRFPTKRRSKLSPRSDGPFEILAKVNDNAYKVRLPGTPKEAATFNIADIEPYY 106
            VW+H RKDRFP  R+SKL PR+DGPF++L K+NDNAYK+ LP     + TFNIAD++PY 
Sbjct: 1104 VWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGVSPTFNIADLKPYL 1163

Query: 105  DPDESIPSLRANFVEAGEDDRQTPEDPIVLP 13
              ++ + S R   ++ GEDD   P +    P
Sbjct: 1164 GEEDELES-RTTQMQEGEDDEDIPSNDTTTP 1193


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