BLASTX nr result

ID: Atractylodes22_contig00053254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053254
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]   123   1e-26
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   122   2e-26
emb|CBI20740.3| unnamed protein product [Vitis vinifera]              122   2e-26
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   117   1e-24
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...   115   3e-24

>emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/97 (61%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2    SCSVVDVKYSNFVLLTESKLDDDVGNVEMELYLVSKFVKCKVSSCVELRLTAEQVAKAKC 181
            SC++V+  YS FVLL ESKLDDDVGN+EMELYL+SKFV+  VSSC ++ L AEQV KA  
Sbjct: 1736 SCNIVNELYSGFVLLIESKLDDDVGNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMX 1795

Query: 182  FQELFFNGIFGKLYISDKESGLARDFLVQTNQ-ALWN 289
            F ELFFN +FG+L+I  K SG+ R+FL+ T Q +LW+
Sbjct: 1796 FHELFFNSLFGRLFIGSKSSGVRREFLLNTQQKSLWS 1832


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/97 (61%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2    SCSVVDVKYSNFVLLTESKLDDDVGNVEMELYLVSKFVKCKVSSCVELRLTAEQVAKAKC 181
            SC++V+  YS FVLL ESKLDDDVGN+EMELYL+SKFV+  VSSC ++ L AEQV KA  
Sbjct: 727  SCNIVNELYSGFVLLIESKLDDDVGNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMR 786

Query: 182  FQELFFNGIFGKLYISDKESGLARDFLVQTNQ-ALWN 289
            F ELFFN +FG+L+I  K SG+ R+FL+ T Q +LW+
Sbjct: 787  FHELFFNSLFGRLFIGSKSSGVRREFLLNTQQKSLWS 823


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/97 (61%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2    SCSVVDVKYSNFVLLTESKLDDDVGNVEMELYLVSKFVKCKVSSCVELRLTAEQVAKAKC 181
            SC++V+  YS FVLL ESKLDDDVGN+EMELYL+SKFV+  VSSC ++ L AEQV KA  
Sbjct: 735  SCNIVNELYSGFVLLIESKLDDDVGNIEMELYLISKFVRTSVSSCGQVSLDAEQVMKAMR 794

Query: 182  FQELFFNGIFGKLYISDKESGLARDFLVQTNQ-ALWN 289
            F ELFFN +FG+L+I  K SG+ R+FL+ T Q +LW+
Sbjct: 795  FHELFFNSLFGRLFIGSKSSGVRREFLLNTQQKSLWS 831


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
            3a-like [Cucumis sativus]
          Length = 1639

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/96 (62%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2    SCSVVDVKYSNFVLLTESKLDDDVGNVEMELYLVSKFVKCKVSSCVELRLTAEQVAKAKC 181
            SCSV+   YS FVLL ESKLDDDV N E+ELYL+SK VK  VS   E+ L AEQ+ KAKC
Sbjct: 720  SCSVIYEVYSGFVLLIESKLDDDVSNFELELYLLSKMVKASVSFGGEVHLDAEQITKAKC 779

Query: 182  FQELFFNGIFGKLYISDKESGLARDFLVQTN-QALW 286
            FQELFFNG+FG+L+I  K +G  RDFL+Q +   LW
Sbjct: 780  FQELFFNGLFGRLFIGSKTTGKKRDFLLQKDTNPLW 815


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/96 (57%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
 Frame = +2

Query: 5    CSVVDVKYSNFVLLTESKLDDDVGNVEMELYLVSKFVKCKVSSCVELRLTAEQVAKAKCF 184
            C+++ V YS FVLL ESKL DDVGN EM+L+L+ K VK  VSSC ++RL AEQ+ KAK F
Sbjct: 733  CNIITVVYSGFVLLIESKLADDVGNTEMDLFLIGKMVKASVSSCGQVRLNAEQMMKAKRF 792

Query: 185  QELFFNGIFGKLYISDKESGLARDFLVQ-TNQALWN 289
            QE FFNG+FGKL++  K SG  R+FL++    +LW+
Sbjct: 793  QEFFFNGLFGKLFVGSKSSGAPREFLLRDKTSSLWS 828


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