BLASTX nr result

ID: Atractylodes22_contig00053230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053230
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    92   5e-32
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    90   8e-32
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    91   9e-31
ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, parti...    95   3e-30
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...    99   6e-30

>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 91.7 bits (226), Expect(2) = 5e-32
 Identities = 43/71 (60%), Positives = 56/71 (78%)
 Frame = -3

Query: 347 SGYYRKFVSGYGQIARPLTDLLKKNMFEWNDQAATAFEDLKKALSSAPVLALPDFKKPFV 168
           +GYYR+FV GY  IA PLT  LKK+ F+W+ +A TAF+ LK+AL++APVLALP+F+ PFV
Sbjct: 696 TGYYRRFVKGYATIASPLTQQLKKDAFQWSKEATTAFQLLKEALTTAPVLALPNFELPFV 755

Query: 167 IETDASGEAWG 135
           IE +ASG   G
Sbjct: 756 IEANASGYGLG 766



 Score = 71.2 bits (173), Expect(2) = 5e-32
 Identities = 33/48 (68%), Positives = 40/48 (83%)
 Frame = -2

Query: 144 GLGAVLMQEERPIAFHSQVLGTRARQKAIYEKELMAIVFAILKWRPYL 1
           GLG VL+Q+  PIA+ S+VLG RAR K+IYEKELMA+V A+LKWR YL
Sbjct: 764 GLGVVLLQQGHPIAYFSKVLGVRARAKSIYEKELMAVVLAVLKWRHYL 811


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 89.7 bits (221), Expect(2) = 8e-32
 Identities = 42/71 (59%), Positives = 54/71 (76%)
 Frame = -3

Query: 347  SGYYRKFVSGYGQIARPLTDLLKKNMFEWNDQAATAFEDLKKALSSAPVLALPDFKKPFV 168
            +GYYRKFV+ Y  IARPLT+ LKK+ F+W+  A  AF+ LK A+ SAPVLA+P+F+  FV
Sbjct: 928  TGYYRKFVANYAHIARPLTEQLKKDNFKWSATATEAFKQLKSAMVSAPVLAMPNFQLTFV 987

Query: 167  IETDASGEAWG 135
            +ETDASG   G
Sbjct: 988  VETDASGYGMG 998



 Score = 72.4 bits (176), Expect(2) = 8e-32
 Identities = 32/48 (66%), Positives = 43/48 (89%)
 Frame = -2

Query: 144  GLGAVLMQEERPIAFHSQVLGTRARQKAIYEKELMAIVFAILKWRPYL 1
            G+GAVLMQ+ RPIA++S++LGTRA+ K++YEKELMAI FA+ KW+ YL
Sbjct: 996  GMGAVLMQDNRPIAYYSKLLGTRAQLKSVYEKELMAICFAVQKWKYYL 1043


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 90.5 bits (223), Expect(2) = 9e-31
 Identities = 41/69 (59%), Positives = 53/69 (76%)
 Frame = -3

Query: 341 YYRKFVSGYGQIARPLTDLLKKNMFEWNDQAATAFEDLKKALSSAPVLALPDFKKPFVIE 162
           YYRKF+  YG+IA+PLT+L KK+ F WN++   AF+ LK+ L+++PVLALPDF K FVIE
Sbjct: 621 YYRKFIKDYGKIAKPLTELTKKDAFMWNEKTQDAFDQLKRRLTTSPVLALPDFNKEFVIE 680

Query: 161 TDASGEAWG 135
            DASG   G
Sbjct: 681 CDASGGGIG 689



 Score = 68.2 bits (165), Expect(2) = 9e-31
 Identities = 29/49 (59%), Positives = 39/49 (79%)
 Frame = -2

Query: 147 GGLGAVLMQEERPIAFHSQVLGTRARQKAIYEKELMAIVFAILKWRPYL 1
           GG+GA+LMQ+ +P+A++S+ LG R   K+ YEKELMA+V AI  WRPYL
Sbjct: 686 GGIGAILMQDRKPVAYYSKALGVRNLTKSAYEKELMAVVLAIQHWRPYL 734


>ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
          Length = 1049

 Score = 95.1 bits (235), Expect(2) = 3e-30
 Identities = 44/71 (61%), Positives = 56/71 (78%)
 Frame = -3

Query: 347  SGYYRKFVSGYGQIARPLTDLLKKNMFEWNDQAATAFEDLKKALSSAPVLALPDFKKPFV 168
            SGYYR+FV GYG+IA PLT LL+KN F W++QA  AFE LK A+++ P+LALP++  PF+
Sbjct: 816  SGYYRRFVKGYGEIAAPLTRLLQKNSFAWDEQATEAFEKLKMAMTTIPMLALPNWDLPFL 875

Query: 167  IETDASGEAWG 135
            IETDASG   G
Sbjct: 876  IETDASGTGLG 886



 Score = 62.0 bits (149), Expect(2) = 3e-30
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = -2

Query: 144  GLGAVLMQEERPIAFHSQVLGTRARQKAIYEKELMAIVFAILKWRPYL 1
            GLGAVL Q   PIAF SQ L  RA+ K+IYE+ELMA+V ++ KWR YL
Sbjct: 884  GLGAVLSQNGHPIAFFSQKLSPRAQGKSIYERELMAVVLSVQKWRHYL 931


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score = 99.0 bits (245), Expect(2) = 6e-30
 Identities = 45/67 (67%), Positives = 57/67 (85%)
 Frame = -3

Query: 347  SGYYRKFVSGYGQIARPLTDLLKKNMFEWNDQAATAFEDLKKALSSAPVLALPDFKKPFV 168
            +GYYR +V GYG IARPLT+LLKK+ F+W+ +A  AF+ LKKA+  APVLALP+F+KPFV
Sbjct: 2023 TGYYRHYVKGYGSIARPLTELLKKDGFQWSKEAELAFDSLKKAMVEAPVLALPNFEKPFV 2082

Query: 167  IETDASG 147
            IE+DASG
Sbjct: 2083 IESDASG 2089



 Score = 57.0 bits (136), Expect(2) = 6e-30
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = -2

Query: 144  GLGAVLMQEERPIAFHSQVLGTRARQKAIYEKELMAIVFAILKWRPYL 1
            G+GAVLMQ+ +PIAF S  L  R + K  YE+ELMA+V A+ KW+ YL
Sbjct: 2091 GVGAVLMQDGKPIAFFSHGLTEREQLKPAYERELMAVVLAVQKWKHYL 2138


Top