BLASTX nr result
ID: Atractylodes22_contig00053224
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00053224
(618 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 80 2e-20
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 70 3e-18
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 69 4e-18
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 69 4e-18
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 69 5e-18
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 79.7 bits (195), Expect(3) = 2e-20
Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Frame = -3
Query: 547 LSKILKEVRYVPELKRILVSLARLDKEGFEMKIKQVIMKVTKWSIVVFKGMCKNGLYLL- 371
+ ++L++VRY+PELKR L+SL LDK G+ K + ++V + S+ V KG KNGLY L
Sbjct: 313 IERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKGTIKNGLYTLI 372
Query: 370 -EAC***FSSFASERIESKFELIW---LGHVSEKGLVELEKQNXXXXXXXXXXXXXXXXX 203
+ S+ E + + +W LGH+S +GL ELEKQ
Sbjct: 373 GQTVTGKVSTVLKEDVGT--TKLWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCV 430
Query: 202 LGKALV*KTI----VPNGTLDLIHTDLWG 128
GKA K LD IH+DLWG
Sbjct: 431 FGKATRVKFAKAIHETQNQLDYIHSDLWG 459
Score = 42.4 bits (98), Expect(3) = 2e-20
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = -1
Query: 129 GLTKALSHSGARYFMLLVDDFSRKL*VFI*KTKDKSF*NFTNW 1
G ++ S GARYF+ L+DD+SRK+ ++ K K ++F F W
Sbjct: 459 GPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEW 501
Score = 22.7 bits (47), Expect(3) = 2e-20
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 612 MSNNLPCKITGIGSVKFR 559
+ NN CKI G G+V+ +
Sbjct: 291 LGNNKHCKILGTGTVRIK 308
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 69.7 bits (169), Expect(3) = 3e-18
Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Frame = -3
Query: 547 LSKILKEVRYVPELKRILVSLARLDKEGFEMKIKQVIMKVTKWSIVVFKGMCKNG-LYLL 371
+++ LK VRY+P + R L+SL+ LD EG++ ++KV+K S+V KG + LY+L
Sbjct: 343 MTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDVNSAKLYVL 402
Query: 370 EAC***FSSFASERI---ESKFELIW---LGHVSEKGLVELEKQNXXXXXXXXXXXXXXX 209
C S A+ I E +W LGH+S G+ EL K+N
Sbjct: 403 RGCTLTGSDSAAAAITNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEH 462
Query: 208 XXLG--KALV*KTIV--PNGTLDLIHTDLWG 128
G K + T V GTLD +H DLWG
Sbjct: 463 CIFGKHKRVQFNTSVHTTKGTLDYVHADLWG 493
Score = 40.4 bits (93), Expect(3) = 3e-18
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1
Query: 129 GLTKALSHSGARYFMLLVDDFSRKL*VFI*KTKDKSF*NFTNW 1
G +K S GARY + ++DD+SRK+ + K KD +F F NW
Sbjct: 493 GPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNW 535
Score = 26.9 bits (58), Expect(3) = 3e-18
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 612 MSNNLPCKITGIGSVKFRCNAG*VRS*KRL 523
M ++ PC I GIGSV+ + + G R+ K +
Sbjct: 321 MGDDNPCAIVGIGSVQIKTDDGMTRTLKNV 350
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 69.3 bits (168), Expect(3) = 4e-18
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Frame = -3
Query: 547 LSKILKEVRYVPELKRILVSLARLDKEGFEMKIKQVIMKVTKWSIVVFKGMCKNG-LYLL 371
+++ LK VRY+P + R L+SL+ LD EG++ ++KV+K S+V KG + LY+L
Sbjct: 345 MTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVL 404
Query: 370 EAC***FSSFASERI---ESKFELIW---LGHVSEKGLVELEKQNXXXXXXXXXXXXXXX 209
C S A+ + E +W LGH+S G+ EL K+N
Sbjct: 405 RGCTLPGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGYTSSKIKFCEH 464
Query: 208 XXLG--KALV*KTIV--PNGTLDLIHTDLWG 128
G K + T V GTLD +H DLWG
Sbjct: 465 CIFGKHKRVQFNTSVHTTKGTLDYVHADLWG 495
Score = 40.4 bits (93), Expect(3) = 4e-18
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1
Query: 129 GLTKALSHSGARYFMLLVDDFSRKL*VFI*KTKDKSF*NFTNW 1
G +K S GARY + ++DD+SRK+ + K KD +F F NW
Sbjct: 495 GPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNW 537
Score = 26.9 bits (58), Expect(3) = 4e-18
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 612 MSNNLPCKITGIGSVKFRCNAG*VRS*KRL 523
M ++ PC I GIGSV+ + + G R+ K +
Sbjct: 323 MGDDNPCAIVGIGSVQIKTDDGMTRTLKNV 352
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 69.3 bits (168), Expect(3) = 4e-18
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Frame = -3
Query: 547 LSKILKEVRYVPELKRILVSLARLDKEGFEMKIKQVIMKVTKWSIVVFKGMCKNG-LYLL 371
+++ LK VRY+P + R L+SL+ LD EG++ ++KV+K S+V KG + LY+L
Sbjct: 343 MTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVL 402
Query: 370 EAC***FSSFASERI---ESKFELIW---LGHVSEKGLVELEKQNXXXXXXXXXXXXXXX 209
C S A+ + E +W LGH+S G+ EL K+N
Sbjct: 403 RGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEH 462
Query: 208 XXLG--KALV*KTIV--PNGTLDLIHTDLWG 128
G K + T V GTLD +H DLWG
Sbjct: 463 CIFGKHKRVQFNTSVHTTKGTLDYVHADLWG 493
Score = 40.4 bits (93), Expect(3) = 4e-18
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1
Query: 129 GLTKALSHSGARYFMLLVDDFSRKL*VFI*KTKDKSF*NFTNW 1
G +K S GARY + ++DD+SRK+ + K KD +F F NW
Sbjct: 493 GPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNW 535
Score = 26.9 bits (58), Expect(3) = 4e-18
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 612 MSNNLPCKITGIGSVKFRCNAG*VRS*KRL 523
M ++ PC I GIGSV+ + + G R+ K +
Sbjct: 321 MGDDNPCAIVGIGSVQIKTDDGMTRTLKNV 350
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 69.3 bits (168), Expect(3) = 5e-18
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Frame = -3
Query: 547 LSKILKEVRYVPELKRILVSLARLDKEGFEMKIKQVIMKVTKWSIVVFKGMCKNG-LYLL 371
+++ LK VRY+P + R L+SL+ LD EG++ ++KV+K S+V KG + LY+L
Sbjct: 343 MTRTLKNVRYIPGMSRNLISLSTLDAEGYKYSGSDGVLKVSKGSLVCLKGDLNSAKLYVL 402
Query: 370 EAC***FSSFASERI---ESKFELIW---LGHVSEKGLVELEKQNXXXXXXXXXXXXXXX 209
C S A+ + E +W LGH+S G+ EL K+N
Sbjct: 403 RGCTLTGSDSAAAAVTNDEPSKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEH 462
Query: 208 XXLG--KALV*KTIV--PNGTLDLIHTDLWG 128
G K + T V GTLD +H DLWG
Sbjct: 463 CIFGKHKRVQFNTSVHTTKGTLDYVHADLWG 493
Score = 40.0 bits (92), Expect(3) = 5e-18
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1
Query: 129 GLTKALSHSGARYFMLLVDDFSRKL*VFI*KTKDKSF*NFTNW 1
G +K S GARY + ++DD+SRK+ + K KD +F F NW
Sbjct: 493 GPSKKPSLGGARYMLTVIDDYSRKVWPYFLKHKDDTFTAFKNW 535
Score = 26.9 bits (58), Expect(3) = 5e-18
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 612 MSNNLPCKITGIGSVKFRCNAG*VRS*KRL 523
M ++ PC I GIGSV+ + + G R+ K +
Sbjct: 321 MGDDNPCAIVGIGSVQIKTDDGMTRTLKNV 350