BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053180
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   120   2e-25
emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]   115   3e-24
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]   114   8e-24
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]   114   8e-24
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   114   1e-23

>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  120 bits (300), Expect = 2e-25
 Identities = 61/117 (52%), Positives = 81/117 (69%)
 Frame = +1

Query: 1    RLSRTLLSLGFKGSKTDPSLFIYSSKGTLLYMLVYVDDIILTVNNPTAIDQIIKNMS*TF 180
            RLS  L SLGF  SK D SLFIY++  T +Y+LVYVDDII+T ++P AID ++  +   F
Sbjct: 1084 RLSEKLQSLGFVPSKADVSLFIYNAHSTAIYILVYVDDIIITGSSPHAIDNVLAKLKDDF 1143

Query: 181  AVQDMGTLSYFLGIEVTPKGADLLLSQRKYILEILQKAGLSQAKPVATPITTTGNLS 351
            A++D+G L YFLGIEV  KG  LLL Q KY  ++L++ G+   KPV TP+ T+  LS
Sbjct: 1144 AIKDLGDLHYFLGIEVHRKGDGLLLCQEKYARDLLKRVGMECCKPVHTPVATSEKLS 1200


>emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]
          Length = 555

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/124 (45%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1   RLSRTLLSLGFKGSKTDPSLFIYSSKGTLLYMLVYVDDIILTVNNPTAIDQIIKNMS*TF 180
           +L + LL+ GFK S +D SLF++ S   +LY+L+YVDDIILT N+ T + Q++  ++  F
Sbjct: 418 KLRQFLLTSGFKNSHSDTSLFVFRSSNHVLYLLIYVDDIILTGNSDTLVSQLVDYLAQRF 477

Query: 181 AVQDMGTLSYFLGIEVTPKGADLLLSQRKYILEILQKAGLSQAKPVATPI-TTTGNLSLG 357
           +++D+G LSYFLG+EV P    +LLSQR+YI ++L++  ++ AKPV TP+ T++  +SL 
Sbjct: 478 SLKDLGQLSYFLGVEVVPHRLGILLSQRRYIQDLLKQTNMANAKPVLTPLPTSSTTISLT 537

Query: 358 DSPP 369
              P
Sbjct: 538 SGTP 541


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/122 (45%), Positives = 83/122 (68%)
 Frame = +1

Query: 1    RLSRTLLSLGFKGSKTDPSLFIYSSKGTLLYMLVYVDDIILTVNNPTAIDQIIKNMS*TF 180
            R S  LL+LGF  S+ D SLF++  + +L+Y+L+YVDDII+T NNP+ +D   + +   F
Sbjct: 866  RFSSFLLTLGFSCSRADTSLFVFHQQSSLIYLLLYVDDIIVTGNNPSLLDSFTRKLHSEF 925

Query: 181  AVQDMGTLSYFLGIEVTPKGADLLLSQRKYILEILQKAGLSQAKPVATPITTTGNLSLGD 360
            A +D+G+LSYFLG+E +P    L +SQ KY  +IL +A L  +KPV TP+  + +L++  
Sbjct: 926  ATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTVAG 985

Query: 361  SP 366
            SP
Sbjct: 986  SP 987


>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
          Length = 1501

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/122 (45%), Positives = 83/122 (68%)
 Frame = +1

Query: 1    RLSRTLLSLGFKGSKTDPSLFIYSSKGTLLYMLVYVDDIILTVNNPTAIDQIIKNMS*TF 180
            R S  LL+LGF  S+ D SLF++  + +L+Y+L+YVDDII+T NNP+ +D   + +   F
Sbjct: 983  RFSSFLLTLGFSCSRADTSLFVFHQQSSLIYLLLYVDDIIVTGNNPSLLDSFTRKLHSEF 1042

Query: 181  AVQDMGTLSYFLGIEVTPKGADLLLSQRKYILEILQKAGLSQAKPVATPITTTGNLSLGD 360
            A +D+G+LSYFLG+E +P    L +SQ KY  +IL +A L  +KPV TP+  + +L++  
Sbjct: 1043 ATKDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTVAG 1102

Query: 361  SP 366
            SP
Sbjct: 1103 SP 1104


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/118 (43%), Positives = 85/118 (72%)
 Frame = +1

Query: 1    RLSRTLLSLGFKGSKTDPSLFIYSSKGTLLYMLVYVDDIILTVNNPTAIDQIIKNMS*TF 180
            +LS+ L  LGF+GSK D SLF Y+  G ++++LVYVDDII+  +   A+  ++K++   F
Sbjct: 907  KLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQDAVPALLKDLQKDF 966

Query: 181  AVQDMGTLSYFLGIEVTPKGADLLLSQRKYILEILQKAGLSQAKPVATPITTTGNLSL 354
            A++D+G L YFLGIEV    + ++L+Q KY+ ++L++ G++  KPV+TP++T+  L+L
Sbjct: 967  ALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPLSTSEKLTL 1024