BLASTX nr result

ID: Atractylodes22_contig00053179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053179
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621588.1| DNA-directed RNA polymerase [Medicago trunca...    64   1e-08
ref|XP_003636833.1| Cytochrome P450 [Medicago truncatula] gi|355...    63   2e-08
gb|ABD32801.1| H+-transporting two-sector ATPase, alpha/beta sub...    62   6e-08
ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813...    61   1e-07
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    60   2e-07

>ref|XP_003621588.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355496603|gb|AES77806.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 895

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
 Frame = +2

Query: 86  VWNKRIPHKVNLFIWRLLRNVIPTNVNLFSKGIDITTVRCDLCNNG---IDDISHIYGDC 256
           +WNK +P KV+LF WRLLRN +PT  NL  +   I      +C  G   ++D  H++  C
Sbjct: 219 IWNKEVPLKVSLFAWRLLRNRLPTTNNLVKR--QIIQPNAQVCVGGCGMLEDAEHLFFSC 276

Query: 257 IFMRKVRSGLSQWLQINI 310
            F  K+  G+S WL+ +I
Sbjct: 277 DFFGKLWYGISHWLRFHI 294


>ref|XP_003636833.1| Cytochrome P450 [Medicago truncatula] gi|355502768|gb|AES83971.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 1639

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
 Frame = +2

Query: 86   VWNKRIPHKVNLFIWRLLRNVIPTNVNLFSKGIDITTVRCDLCNNG---IDDISHIYGDC 256
            +WNK +P K++LF WRLLR+ +PT  NL  +   I      LC  G   I+D  H++  C
Sbjct: 1469 IWNKEVPLKISLFAWRLLRDRLPTTNNLIKR--HILHPNAQLCVGGCGTIEDAKHLFLSC 1526

Query: 257  IFMRKVRSGLSQWLQINI 310
             F  K+  G+S WL  NI
Sbjct: 1527 DFFGKLWYGISNWLGYNI 1544


>gb|ABD32801.1| H+-transporting two-sector ATPase, alpha/beta subunit, central
           region, related [Medicago truncatula]
          Length = 210

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
 Frame = +2

Query: 65  TSTSNITVWNKRIPHKVNLFIWRLLRNVIPTNVNLFSKGIDITTVRCDLCNNG---IDDI 235
           ++T    +WNK +P K++LF WRLLR+ +PT  NL  + I +   R  LC  G   ++D 
Sbjct: 62  SATHTSEIWNKEVPLKISLFAWRLLRDRLPTTDNLIKRHILLPNAR--LCLGGCGMMEDA 119

Query: 236 SHIYGDCIFMRKVRSGLSQWLQINI 310
            H++  C F  K+   +S WL  +I
Sbjct: 120 KHLFLSCDFFGKLWYDISHWLSYHI 144


>ref|XP_003540911.1| PREDICTED: uncharacterized protein LOC100813631 [Glycine max]
          Length = 1227

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 23/57 (40%), Positives = 37/57 (64%)
 Frame = +2

Query: 86  VWNKRIPHKVNLFIWRLLRNVIPTNVNLFSKGIDITTVRCDLCNNGIDDISHIYGDC 256
           +WN  IP +V +FIWRLL++ +PT  NL  + +DI    C LC  G +++ H++ +C
Sbjct: 405 IWNLNIPPRVAVFIWRLLKDRLPTKGNLLRRHVDIQDAGCPLCGQGQEEVGHLFFNC 461


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = +2

Query: 47   IDHSPYTSTSN-ITVWNKRIPHKVNLFIWRLLRNVIPTNVNLFSKGIDITTVRCDLCNNG 223
            +D S +    N + +WN ++P KV  F+WR  RN +PT V L  +G++ T   C LC N 
Sbjct: 1406 VDLSTHRCDGNWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKT-CALCENE 1464

Query: 224  IDDISHIYGDCIFMRKVRSGLSQWLQI 304
             +D  H++  C   R+    L  W ++
Sbjct: 1465 DEDSMHLFFYCTKSRQCWQQLGLWSKV 1491


Top