BLASTX nr result

ID: Atractylodes22_contig00053174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053174
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554896.1| PREDICTED: uncharacterized protein LOC100786...   144   1e-32
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc...   139   2e-31
ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 ...   137   9e-31
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...   137   9e-31
ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 ...   136   2e-30

>ref|XP_003554896.1| PREDICTED: uncharacterized protein LOC100786145 [Glycine max]
          Length = 649

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/118 (61%), Positives = 84/118 (71%)
 Frame = -3

Query: 355 DMAYFLLYVDDIILTTSSDTLRKSIMTLLSSEFAMKDLGPLSYFLGIAVTHHAGGLFLSQ 176
           D  Y LLYVDDII TTSS +LR +I+  L SEF+M DLGPL+YFLG++ T H+GGLFL Q
Sbjct: 111 DTTYILLYVDDIIHTTSSHSLRDTIIAALRSEFSMMDLGPLNYFLGVSTTRHSGGLFLHQ 170

Query: 175 KNYAEEIIERTGMSGCKPPSTTVDTKPKLSATSSPPYTGPSQYRSLARALHYLTFTRP 2
             YAE+II R  M  CKP  T +DTK KLSATS   +  P+ Y SL  AL YLTFTRP
Sbjct: 171 SKYAEDIISRAKMVNCKPALTPMDTKSKLSATSGEKFDDPTLYHSLVDALQYLTFTRP 228


>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 976

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/118 (58%), Positives = 83/118 (70%)
 Frame = -3

Query: 355  DMAYFLLYVDDIILTTSSDTLRKSIMTLLSSEFAMKDLGPLSYFLGIAVTHHAGGLFLSQ 176
            D  Y LLYVDDI+LT SS  + +  +T L  EF+MKDLGPL++FLGI VT H+GGL L+Q
Sbjct: 648  DTVYLLLYVDDIVLTASSSNILRWTITSLQKEFSMKDLGPLNHFLGINVTPHSGGLLLTQ 707

Query: 175  KNYAEEIIERTGMSGCKPPSTTVDTKPKLSATSSPPYTGPSQYRSLARALHYLTFTRP 2
            + Y  EI+ER GMS CKP  T VDT  K S   SP  + P+ +RSLA AL YLTFTRP
Sbjct: 708  RQYCLEILERAGMSDCKPCLTPVDTSAKFSTEGSPSVSDPTDFRSLAGALQYLTFTRP 765


>ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 [Sorghum bicolor]
           gi|241947143|gb|EES20288.1| hypothetical protein
           SORBIDRAFT_0013s009070 [Sorghum bicolor]
          Length = 1219

 Score =  137 bits (345), Expect = 9e-31
 Identities = 72/118 (61%), Positives = 82/118 (69%)
 Frame = -3

Query: 355 DMAYFLLYVDDIILTTSSDTLRKSIMTLLSSEFAMKDLGPLSYFLGIAVTHHAGGLFLSQ 176
           D AY LLYVDDIILT SS  L + I  LL SEFAM DLG L +FLGIAVT   GGLFLSQ
Sbjct: 452 DTAYLLLYVDDIILTASSPALLRRITELLHSEFAMTDLGDLHHFLGIAVTRTTGGLFLSQ 511

Query: 175 KNYAEEIIERTGMSGCKPPSTTVDTKPKLSATSSPPYTGPSQYRSLARALHYLTFTRP 2
           + YA E+++  GM+ C   +T VDT+ KLSAT   P    +QYRSLA AL YLT TRP
Sbjct: 512 RQYAVELLQHAGMAECHSTATPVDTRAKLSATDGAPVADATQYRSLAGALQYLTLTRP 569


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1099

 Score =  137 bits (345), Expect = 9e-31
 Identities = 70/118 (59%), Positives = 83/118 (70%)
 Frame = -3

Query: 355  DMAYFLLYVDDIILTTSSDTLRKSIMTLLSSEFAMKDLGPLSYFLGIAVTHHAGGLFLSQ 176
            D+ Y LLYVDDI+LT SS  L +  +  L +EF+MKDLG L +FLGI VT  + GL LSQ
Sbjct: 781  DLVYLLLYVDDIVLTASSAGLLRWAIQALQAEFSMKDLGTLHHFLGITVTSDSSGLLLSQ 840

Query: 175  KNYAEEIIERTGMSGCKPPSTTVDTKPKLSATSSPPYTGPSQYRSLARALHYLTFTRP 2
            + Y+ EI+ER GMS CKP ST VDT  KLS+T   P   P+ YRSLA AL YLTFTRP
Sbjct: 841  RQYSIEILERAGMSDCKPCSTPVDTNAKLSSTDGSPVLDPTDYRSLASALQYLTFTRP 898


>ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 [Sorghum bicolor]
            gi|241947124|gb|EES20269.1| hypothetical protein
            SORBIDRAFT_0139s002040 [Sorghum bicolor]
          Length = 1822

 Score =  136 bits (342), Expect = 2e-30
 Identities = 68/118 (57%), Positives = 82/118 (69%)
 Frame = -3

Query: 355  DMAYFLLYVDDIILTTSSDTLRKSIMTLLSSEFAMKDLGPLSYFLGIAVTHHAGGLFLSQ 176
            + AY LLYVDDI+LT SS++L + I+  L  EFAMKDLG L +FLG+ V  H  GL L Q
Sbjct: 1501 ETAYLLLYVDDIVLTASSESLLRRIIASLQQEFAMKDLGQLHHFLGVTVEPHPAGLLLHQ 1560

Query: 175  KNYAEEIIERTGMSGCKPPSTTVDTKPKLSATSSPPYTGPSQYRSLARALHYLTFTRP 2
            + Y  +I+ER GM+ CKP ST VDT+ KLS     P T P+ YRSLA AL YLTFTRP
Sbjct: 1561 RQYTLDILERAGMTDCKPCSTPVDTQGKLSEAEGTPVTDPTAYRSLAGALQYLTFTRP 1618


Top