BLASTX nr result

ID: Atractylodes22_contig00053096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053096
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]   103   2e-20
ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
ref|XP_002526080.1| pentatricopeptide repeat-containing protein,...    98   6e-19

>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/81 (66%), Positives = 66/81 (81%)
 Frame = -3

Query: 245 GENDRARQVFDGMHEKCVVSWNTLISGYFRNGCANESLRVFKEMADAGVEIDNATVVSVL 66
           GE + AR+VFD M EK VVSWNT+I+GYF+NG AN +L VF +M D+GVEID A+VVSVL
Sbjct: 171 GEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVL 230

Query: 65  PVCAYLKALKVGREVHGMVKE 3
           P C YLK L+VGR VHG+V+E
Sbjct: 231 PACGYLKELEVGRRVHGLVEE 251



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/79 (45%), Positives = 48/79 (60%)
 Frame = -3

Query: 245 GENDRARQVFDGMHEKCVVSWNTLISGYFRNGCANESLRVFKEMADAGVEIDNATVVSVL 66
           G  D AR VFD M E+ VVSW ++I+GY  NG A  +L +FK M   G+  ++ T+  +L
Sbjct: 271 GSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALIL 330

Query: 65  PVCAYLKALKVGREVHGMV 9
             CA L  LK GR +HG V
Sbjct: 331 LACASLNNLKDGRCLHGWV 349


>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
           protein product [Vitis vinifera]
          Length = 676

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/80 (61%), Positives = 62/80 (77%)
 Frame = -3

Query: 245 GENDRARQVFDGMHEKCVVSWNTLISGYFRNGCANESLRVFKEMADAGVEIDNATVVSVL 66
           GE + AR+VFD M E+ +VSWNT+I+GYF+NGC  E+L VF  M   G+E D ATVVSVL
Sbjct: 172 GEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVL 231

Query: 65  PVCAYLKALKVGREVHGMVK 6
           PVC+YLK L+VGR VH +V+
Sbjct: 232 PVCSYLKELEVGRRVHALVE 251



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = -3

Query: 245 GENDRARQVFDGMHEKCVVSWNTLISGYFRNGCANESLRVFKEMADAGVEIDNATVVSVL 66
           G  D A+ +F  M ++ VVSW T+++GY  NG A  +L + + M    V+ +  T+ SVL
Sbjct: 273 GNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVL 332

Query: 65  PVCAYLKALKVGREVHG 15
             CA L +LK GR +HG
Sbjct: 333 SACASLYSLKHGRCLHG 349


>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/80 (61%), Positives = 62/80 (77%)
 Frame = -3

Query: 245 GENDRARQVFDGMHEKCVVSWNTLISGYFRNGCANESLRVFKEMADAGVEIDNATVVSVL 66
           GE + AR+VFD M E+ +VSWNT+I+GYF+NGC  E+L VF  M   G+E D ATVVSVL
Sbjct: 172 GEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVL 231

Query: 65  PVCAYLKALKVGREVHGMVK 6
           PVC+YLK L+VGR VH +V+
Sbjct: 232 PVCSYLKELEVGRRVHALVE 251



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = -3

Query: 245 GENDRARQVFDGMHEKCVVSWNTLISGYFRNGCANESLRVFKEMADAGVEIDNATVVSVL 66
           G  D A+ +F  M ++ VVSW T+++GY  NG A  +L + + M    V+ +  T+ SVL
Sbjct: 273 GNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVL 332

Query: 65  PVCAYLKALKVGREVHG 15
             CA L +LK GR +HG
Sbjct: 333 SACASLYSLKHGRCLHG 349


>ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/81 (56%), Positives = 61/81 (75%)
 Frame = -3

Query: 245 GENDRARQVFDGMHEKCVVSWNTLISGYFRNGCANESLRVFKEMADAGVEIDNATVVSVL 66
           GE + A+ VFD M E+ V+SWNT+I+GYFRN CA +++ V+  M D GVE D ATVVSVL
Sbjct: 162 GEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVL 221

Query: 65  PVCAYLKALKVGREVHGMVKE 3
           P C  LK +++GREVH +V+E
Sbjct: 222 PACGLLKNVELGREVHTLVQE 242


>ref|XP_002526080.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534577|gb|EEF36274.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 502

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 43/78 (55%), Positives = 60/78 (76%)
 Frame = -3

Query: 236 DRARQVFDGMHEKCVVSWNTLISGYFRNGCANESLRVFKEMADAGVEIDNATVVSVLPVC 57
           + A ++FD M E+ V+SWN +I+GYF+NGCA ++L VF +M D GVEID A+VVSVLP C
Sbjct: 109 EAAERIFDVMKERSVISWNIMINGYFKNGCAEKALMVFNQMVDLGVEIDCASVVSVLPAC 168

Query: 56  AYLKALKVGREVHGMVKE 3
            +LK L++GR VH  V++
Sbjct: 169 GHLKELEMGRRVHATVED 186



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/77 (40%), Positives = 42/77 (54%)
 Frame = -3

Query: 245 GENDRARQVFDGMHEKCVVSWNTLISGYFRNGCANESLRVFKEMADAGVEIDNATVVSVL 66
           G    AR VFDGM E+ V+SW ++I+GY  NG    +L +F+ M    +   + T+ SVL
Sbjct: 207 GSMAEARLVFDGMDERDVISWTSMINGYILNGDEKSALTLFRTMQMERIIPSSVTIASVL 266

Query: 65  PVCAYLKALKVGREVHG 15
             C  LK    GR  HG
Sbjct: 267 SACINLKD---GRCFHG 280


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