BLASTX nr result

ID: Atractylodes22_contig00053074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053074
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    62   5e-08
emb|CCH50954.1| T1.2 [Malus x robusta]                                 62   6e-08
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          61   8e-08
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       60   1e-07
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    58   6e-07

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/55 (56%), Positives = 40/55 (72%)
 Frame = -3

Query: 236 AIHLPRRAMEKYRELSNDLHMVFIDLKKAYNSVLIDLIWGSLEGRRVPQRYVRAI 72
           AI+L RR ME+YR+   DLHMVFIDL+KAY+ V  D+IW  LE + V   Y++AI
Sbjct: 284 AIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAI 338


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = -3

Query: 236 AIHLPRRAMEKYRELSNDLHMVFIDLKKAYNSVLIDLIWGSLEGRRVPQRYVRAI 72
           AI+L R+ MEKYR+  NDLHMVFIDL+K Y+ V  D++W  LE + V   Y++AI
Sbjct: 303 AIYLLRKLMEKYRDGKNDLHMVFIDLEKVYDRVPRDILWRILEKKGVRVAYIQAI 357


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -3

Query: 236 AIHLPRRAMEKYRELSNDLHMVFIDLKKAYNSVLIDLIWGSLEGRRVPQRYVRAI 72
           AI+L RR ME+YR    DLHMVFIDL+KAY+ V  +++W  LE  RV   Y+RAI
Sbjct: 174 AIYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVLWKVLEKMRVRIAYIRAI 228


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 60.1 bits (144), Expect(2) = 1e-07
 Identities = 28/55 (50%), Positives = 40/55 (72%)
 Frame = -3

Query: 236 AIHLPRRAMEKYRELSNDLHMVFIDLKKAYNSVLIDLIWGSLEGRRVPQRYVRAI 72
           AI+L RR ME+YR    DLH++FIDL+KAY+ V  +++W +LE + V   Y+RAI
Sbjct: 9   AIYLLRRVMEQYRMAQQDLHLIFIDLEKAYDRVPREILWKALEKKGVRVAYIRAI 63



 Score = 20.4 bits (41), Expect(2) = 1e-07
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 69  DLYVEASTYVRISISETGYFPV 4
           D+Y   ST VR    E+  FP+
Sbjct: 65  DMYDRVSTSVRTQGGESDDFPI 86


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 57.8 bits (138), Expect(2) = 6e-07
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = -3

Query: 236 AIHLPRRAMEKYRELSNDLHMVFIDLKKAYNSVLIDLIWGSLEGRRVPQRYVRAI 72
           AI+L +R ME+YR    DLH+VF DL+K Y+ V  +++W +LE +RV   Y+RAI
Sbjct: 262 AIYLLQRVMERYRTDKKDLHLVFFDLEKGYDRVPREILWKALEKKRVRIAYIRAI 316



 Score = 20.4 bits (41), Expect(2) = 6e-07
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 69  DLYVEASTYVRISISETGYFPV 4
           D+Y  AST V+     T  FP+
Sbjct: 318 DMYERASTSVKTQDGTTEDFPI 339


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