BLASTX nr result

ID: Atractylodes22_contig00052986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052986
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282936.1| PREDICTED: glutamate receptor 2.7-like [Viti...    85   5e-15
ref|XP_002300415.1| glutamate-gated kainate-type ion channel rec...    81   1e-13
ref|XP_003634636.1| PREDICTED: glutamate receptor 2.8-like [Viti...    79   3e-13
emb|CAN71665.1| hypothetical protein VITISV_011992 [Vitis vinifera]    77   1e-12
ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Viti...    75   4e-12

>ref|XP_002282936.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 845

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/96 (48%), Positives = 60/96 (62%)
 Frame = -2

Query: 299 KPVHAAIAAKELIDEHRVKAILGAHTWXXXXXXXXXXXXADHDIPMFLSLAGTTPPHATR 120
           +P+ AA+AA+EL+  HRVKAILG  TW            A   I   LSLA TTP  AT 
Sbjct: 64  EPIQAALAARELVYRHRVKAILGPQTWEEASLVAEVGSQAYTPI---LSLAYTTPQWATE 120

Query: 119 QWPFFIQAVPTQSTQMNAVAAILQSLGIHQVTLIYE 12
           +WPF IQA   QS QM A+AA+++S   H+VT++YE
Sbjct: 121 RWPFLIQASADQSAQMKAIAAVIESQDWHRVTVVYE 156


>ref|XP_002300415.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222847673|gb|EEE85220.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 867

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/95 (47%), Positives = 58/95 (61%)
 Frame = -2

Query: 296 PVHAAIAAKELIDEHRVKAILGAHTWXXXXXXXXXXXXADHDIPMFLSLAGTTPPHATRQ 117
           PV AA+AA +LI+  +V+AILG  TW                I   LSLA TTP  AT +
Sbjct: 79  PVCAALAAMDLINNQQVQAILGPQTWEEALSVAEISSQTQVPI---LSLADTTPKWATER 135

Query: 116 WPFFIQAVPTQSTQMNAVAAILQSLGIHQVTLIYE 12
           WP+ +QA P++  QM A+AAI+QS   HQVT+IYE
Sbjct: 136 WPYLLQASPSKQEQMKAIAAIVQSWNWHQVTVIYE 170


>ref|XP_003634636.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 1162

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/96 (45%), Positives = 57/96 (59%)
 Frame = -2

Query: 299  KPVHAAIAAKELIDEHRVKAILGAHTWXXXXXXXXXXXXADHDIPMFLSLAGTTPPHATR 120
            +P+ AA+AA EL+  HRVK ILG  +W            A   I   LSLA  TP  AT 
Sbjct: 861  EPIQAALAALELVYRHRVKVILGPQSWEEASLVAEVGSQAHSPI---LSLAYATPQWATE 917

Query: 119  QWPFFIQAVPTQSTQMNAVAAILQSLGIHQVTLIYE 12
            +WPF IQA   QS QM A+AA+++S   H+VT++YE
Sbjct: 918  RWPFLIQASADQSAQMKAIAAVIKSQDWHRVTVVYE 953



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/98 (37%), Positives = 55/98 (56%)
 Frame = -2

Query: 296 PVHAAIAAKELIDEHRVKAILGAHTWXXXXXXXXXXXXADHDIPMFLSLAGTTPPHATRQ 117
           PV   ++A+ LI + RV+AI+G  TW            A   IP+ +SLA   P  AT +
Sbjct: 74  PVLTLLSARNLIKKRRVQAIIGLETWEEASLVVELGSKAH--IPI-VSLADAAPQWATDR 130

Query: 116 WPFFIQAVPTQSTQMNAVAAILQSLGIHQVTLIYETSS 3
           WPF ++  P +  QM AVAAI+ S G  ++ +IYE ++
Sbjct: 131 WPFLVRVSPEKRLQMKAVAAIIGSWGWRRINVIYEDTN 168


>emb|CAN71665.1| hypothetical protein VITISV_011992 [Vitis vinifera]
          Length = 794

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/96 (42%), Positives = 58/96 (60%)
 Frame = -2

Query: 299 KPVHAAIAAKELIDEHRVKAILGAHTWXXXXXXXXXXXXADHDIPMFLSLAGTTPPHATR 120
           +P+ AA+AA +LI++H+V+AI+G  TW            A   I   LS A  TP  A+ 
Sbjct: 74  EPIQAALAAMDLINKHQVQAIIGPRTWEEASLVAEVGSQAHVPI---LSCASATPQWASE 130

Query: 119 QWPFFIQAVPTQSTQMNAVAAILQSLGIHQVTLIYE 12
           +WPF IQA P Q  ++ AV AI++S G H+V +IYE
Sbjct: 131 RWPFLIQASPNQQAEIEAVTAIIRSWGWHRVAIIYE 166


>ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 1452

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/96 (41%), Positives = 57/96 (59%)
 Frame = -2

Query: 299 KPVHAAIAAKELIDEHRVKAILGAHTWXXXXXXXXXXXXADHDIPMFLSLAGTTPPHATR 120
           +P+ AA+AA +LI++H+V+ I+G  TW            A   I   LS A  TP  A+ 
Sbjct: 686 EPIQAALAAMDLINKHQVQTIIGPRTWEEASLVAEVGSQAHVPI---LSCASATPQWASE 742

Query: 119 QWPFFIQAVPTQSTQMNAVAAILQSLGIHQVTLIYE 12
           +WPF IQA P Q  ++ AV AI++S G H+V +IYE
Sbjct: 743 RWPFLIQASPNQQAEIEAVTAIIRSWGWHRVAIIYE 778


Top