BLASTX nr result

ID: Atractylodes22_contig00052957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052957
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002453623.1| hypothetical protein SORBIDRAFT_04g009135 [S...   121   5e-26
gb|AAX95823.1| retrotransposon protein, putative, unclassified [...   120   9e-26
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   120   9e-26
ref|XP_002449547.1| hypothetical protein SORBIDRAFT_05g018930 [S...   120   2e-25
gb|ACF87376.2| unknown [Zea mays]                                     120   2e-25

>ref|XP_002453623.1| hypothetical protein SORBIDRAFT_04g009135 [Sorghum bicolor]
           gi|241933454|gb|EES06599.1| hypothetical protein
           SORBIDRAFT_04g009135 [Sorghum bicolor]
          Length = 801

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/88 (68%), Positives = 67/88 (76%)
 Frame = +1

Query: 1   VDTTSKLSATTDNPVPDPTLYRSLAGALQYLTFTRPDIAYAVQQVCLFMHAPREPHFNFL 180
           VDT  KLS    +PV DPT YRSLAGALQYLTFTRPDI YAVQQVCL MH PREPH   L
Sbjct: 563 VDTQGKLSEAEGSPVADPTAYRSLAGALQYLTFTRPDITYAVQQVCLHMHDPREPHLTAL 622

Query: 181 KRILRYLKGTSNHGLHLFPSKSYKLIAY 264
           KR+LRYL+GT ++GL L  S S +L+ Y
Sbjct: 623 KRLLRYLRGTVDYGLLLHRSPSTELVVY 650


>gb|AAX95823.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77550348|gb|ABA93145.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 197

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/88 (67%), Positives = 69/88 (78%)
 Frame = +1

Query: 1   VDTTSKLSATTDNPVPDPTLYRSLAGALQYLTFTRPDIAYAVQQVCLFMHAPREPHFNFL 180
           VDT SK+S++  +PV DPT YRSLAG LQYLTFTRPDI+YAVQQVCL MH PREPH   L
Sbjct: 82  VDTCSKMSSSDGSPVADPTDYRSLAGVLQYLTFTRPDISYAVQQVCLHMHDPREPHLAAL 141

Query: 181 KRILRYLKGTSNHGLHLFPSKSYKLIAY 264
           KRILRY++GT + GLH+  S    L+AY
Sbjct: 142 KRILRYIRGTLDLGLHIQRSAQLDLVAY 169


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/88 (64%), Positives = 67/88 (76%)
 Frame = +1

Query: 1    VDTTSKLSATTDNPVPDPTLYRSLAGALQYLTFTRPDIAYAVQQVCLFMHAPREPHFNFL 180
            VD   KL+A    PV DPT YRSLAGALQYLTFTRPDI++AVQQ+CLFMH PRE H N L
Sbjct: 1064 VDMKQKLAADGSPPVADPTFYRSLAGALQYLTFTRPDISFAVQQICLFMHDPREAHLNAL 1123

Query: 181  KRILRYLKGTSNHGLHLFPSKSYKLIAY 264
            K ILRY+KGT +HG+H+    S++L  Y
Sbjct: 1124 KIILRYIKGTISHGIHMTKPTSFELTTY 1151


>ref|XP_002449547.1| hypothetical protein SORBIDRAFT_05g018930 [Sorghum bicolor]
           gi|241935390|gb|EES08535.1| hypothetical protein
           SORBIDRAFT_05g018930 [Sorghum bicolor]
          Length = 619

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/88 (67%), Positives = 68/88 (77%)
 Frame = +1

Query: 1   VDTTSKLSATTDNPVPDPTLYRSLAGALQYLTFTRPDIAYAVQQVCLFMHAPREPHFNFL 180
           VD+ +KLSAT   PV DP+ YRSLAG+LQYLT TRPD+AYAVQQVCLFMH PRE H   +
Sbjct: 374 VDSRAKLSATEGTPVADPSAYRSLAGSLQYLTLTRPDLAYAVQQVCLFMHDPREAHLALI 433

Query: 181 KRILRYLKGTSNHGLHLFPSKSYKLIAY 264
           KRILRY+KGT + GLH+      KLIAY
Sbjct: 434 KRILRYVKGTLSAGLHIGTGPVDKLIAY 461


>gb|ACF87376.2| unknown [Zea mays]
          Length = 526

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/88 (64%), Positives = 71/88 (80%)
 Frame = +1

Query: 1   VDTTSKLSATTDNPVPDPTLYRSLAGALQYLTFTRPDIAYAVQQVCLFMHAPREPHFNFL 180
           VDT SK ++T    +  PT+YRSLAGALQYLT TRPDI+YAVQQVCLFMHAPR+ H + L
Sbjct: 283 VDTNSKPASTDGCLLSQPTVYRSLAGALQYLTLTRPDISYAVQQVCLFMHAPRDTHMSLL 342

Query: 181 KRILRYLKGTSNHGLHLFPSKSYKLIAY 264
           KRILRY++GT ++GLH++ S S  L+AY
Sbjct: 343 KRILRYVRGTLDYGLHIYRSSSLDLLAY 370


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