BLASTX nr result

ID: Atractylodes22_contig00052936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052936
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [...   132   2e-29
gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsi...   130   9e-29
ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabi...   130   9e-29
ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arab...   130   9e-29
gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus...   130   1e-28

>gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
          Length = 364

 Score =  132 bits (333), Expect = 2e-29
 Identities = 68/97 (70%), Positives = 74/97 (76%)
 Frame = +1

Query: 52  GANDVGLDQLEFIHIHKTXXXXXXXXXXXXXXXXXSDSCVEKLRKFARCIGLLFQVVDDI 231
           G  DVGL+ LEFIH+HKT                 SD  VEKLRKFARCIGLLFQVVDDI
Sbjct: 233 GLTDVGLEHLEFIHVHKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDI 292

Query: 232 LDVTKSSSELGKTAGKDLEADKMTYPKLMGLEKSRKF 342
           LDVTKSS+ELGKTAGKDL ADK+TYPKLMG+EKSR+F
Sbjct: 293 LDVTKSSTELGKTAGKDLVADKVTYPKLMGIEKSREF 329


>gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
          Length = 371

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/95 (69%), Positives = 73/95 (76%)
 Frame = +1

Query: 58  NDVGLDQLEFIHIHKTXXXXXXXXXXXXXXXXXSDSCVEKLRKFARCIGLLFQVVDDILD 237
           NDVGL+ LEFIH+HKT                 SD  +E+LRKFARCIGLLFQVVDDILD
Sbjct: 242 NDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILD 301

Query: 238 VTKSSSELGKTAGKDLEADKMTYPKLMGLEKSRKF 342
           VTKSS ELGKTAGKDL ADK+TYPK+MGLEKSR+F
Sbjct: 302 VTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREF 336


>ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
           gi|13432144|sp|P34802.2|GGPP1_ARATH RecName:
           Full=Heterodimeric geranylgeranyl pyrophosphate synthase
           large subunit 1, chloroplastic; Short=GGPP synthase 1;
           Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate
           synthase 1; AltName: Full=Dimethylallyltranstransferase
           1; AltName: Full=Farnesyl diphosphate synthase 1;
           AltName: Full=Farnesyltranstransferase 1; AltName:
           Full=Geranyltranstransferase 1; Flags: Precursor
           gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate
           synthase [Arabidopsis thaliana]
           gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate
           synthase [Arabidopsis thaliana]
           gi|110742524|dbj|BAE99179.1| geranylgeranyl
           pyrophosphate synthase [Arabidopsis thaliana]
           gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate
           synthase 11 [Arabidopsis thaliana]
          Length = 371

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/95 (69%), Positives = 73/95 (76%)
 Frame = +1

Query: 58  NDVGLDQLEFIHIHKTXXXXXXXXXXXXXXXXXSDSCVEKLRKFARCIGLLFQVVDDILD 237
           NDVGL+ LEFIH+HKT                 SD  +E+LRKFARCIGLLFQVVDDILD
Sbjct: 242 NDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILD 301

Query: 238 VTKSSSELGKTAGKDLEADKMTYPKLMGLEKSRKF 342
           VTKSS ELGKTAGKDL ADK+TYPK+MGLEKSR+F
Sbjct: 302 VTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREF 336


>ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
           lyrata] gi|297314857|gb|EFH45280.1| hypothetical protein
           ARALYDRAFT_490952 [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/95 (69%), Positives = 73/95 (76%)
 Frame = +1

Query: 58  NDVGLDQLEFIHIHKTXXXXXXXXXXXXXXXXXSDSCVEKLRKFARCIGLLFQVVDDILD 237
           NDVGL+ LEFIH+HKT                 SD  +E+LRKFARCIGLLFQVVDDILD
Sbjct: 250 NDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILD 309

Query: 238 VTKSSSELGKTAGKDLEADKMTYPKLMGLEKSRKF 342
           VTKSS ELGKTAGKDL ADK+TYPK+MGLEKSR+F
Sbjct: 310 VTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREF 344


>gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
          Length = 356

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/97 (69%), Positives = 72/97 (74%)
 Frame = +1

Query: 52  GANDVGLDQLEFIHIHKTXXXXXXXXXXXXXXXXXSDSCVEKLRKFARCIGLLFQVVDDI 231
           G  D+GLDQLEFIHIHKT                 SD+ VEKLR FARCIGLLFQVVDDI
Sbjct: 224 GGQDIGLDQLEFIHIHKTAALLEASVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVDDI 283

Query: 232 LDVTKSSSELGKTAGKDLEADKMTYPKLMGLEKSRKF 342
           LDVTKSS ELGKTAGKDL  DK TYPKL+GL+KSR+F
Sbjct: 284 LDVTKSSEELGKTAGKDLLVDKTTYPKLLGLDKSRQF 320


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