BLASTX nr result

ID: Atractylodes22_contig00052928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052928
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]         72   6e-11
gb|AFU75190.1| nematode resistance-like protein, partial [Solanu...    71   8e-11
gb|AFU75187.1| nematode resistance-like protein, partial [Solanu...    71   8e-11
gb|AFU75191.1| nematode resistance-like protein, partial [Solanu...    70   1e-10
ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vi...    70   1e-10

>gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = -3

Query: 237  DIGTLSSLEYLILCDNQFARLPF-SISQLTALKRLDLSNCPKLQELPELPPSVTVLFANN 61
            ++G LSSLE LIL  N F+ +P  SIS+ T LKRL L  C +L+ LPELPPS+  +FAN 
Sbjct: 872  NLGFLSSLEILILNGNNFSNIPAASISRFTRLKRLKLHGCGRLESLPELPPSIKGIFANE 931

Query: 60   CKSLRTITSLS 28
            C SL +I  L+
Sbjct: 932  CTSLMSIDQLT 942


>gb|AFU75190.1| nematode resistance-like protein, partial [Solanum stoloniferum]
          Length = 307

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = -3

Query: 237 DIGTLSSLEYLILCDNQFARLPF-SISQLTALKRLDLSNCPKLQELPELPPSVTVLFANN 61
           ++G L SLE LIL  N F+ +P  SIS LT LKRL L +C +L+ LPELPPS+ V+ AN 
Sbjct: 224 NLGFLPSLEILILNGNNFSNIPAASISHLTRLKRLKLHSCGRLESLPELPPSIKVIHANE 283

Query: 60  CKSLRTITSLS 28
           C SL +I  L+
Sbjct: 284 CTSLMSIDELT 294


>gb|AFU75187.1| nematode resistance-like protein, partial [Solanum commersonii]
          Length = 307

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = -3

Query: 237 DIGTLSSLEYLILCDNQFARLPF-SISQLTALKRLDLSNCPKLQELPELPPSVTVLFANN 61
           ++G L SLE LIL  N F+ +P  SIS LT LKRL L +C +L+ LPELPPS+ V+ AN 
Sbjct: 224 NLGFLPSLEILILNGNNFSNIPAASISHLTRLKRLKLHSCGRLESLPELPPSIKVIHANE 283

Query: 60  CKSLRTITSLS 28
           C SL +I  L+
Sbjct: 284 CTSLMSIDELT 294


>gb|AFU75191.1| nematode resistance-like protein, partial [Solanum hougasii]
          Length = 307

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
 Frame = -3

Query: 237 DIGTLSSLEYLILCDNQFARLPF-SISQLTALKRLDLSNCPKLQELPELPPSVTVLFANN 61
           ++G L SLE LIL  N F+ +P  SIS+LT LKRL L +C +L+ LPELPPS+  ++AN 
Sbjct: 224 NLGFLPSLEILILNGNNFSNIPAASISRLTRLKRLKLHSCGRLESLPELPPSIKGIYANE 283

Query: 60  CKSLRTITSLS 28
           C SL +I  L+
Sbjct: 284 CTSLMSIDQLT 294


>ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1133

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/69 (53%), Positives = 46/69 (66%)
 Frame = -3

Query: 234  IGTLSSLEYLILCDNQFARLPFSISQLTALKRLDLSNCPKLQELPELPPSVTVLFANNCK 55
            +G LSSLE L L +N F  LP +IS+L  LK L L NC +LQ LPELP S+  + A NC 
Sbjct: 840  LGFLSSLEDLDLSENNFVTLPSNISRLPHLKMLGLENCKRLQALPELPTSIRSIMARNCT 899

Query: 54   SLRTITSLS 28
            SL TI++ S
Sbjct: 900  SLETISNQS 908


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