BLASTX nr result

ID: Atractylodes22_contig00052910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052910
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat...   171   7e-41
emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]   171   7e-41
ref|NP_177580.1| pentatricopeptide repeat-containing protein [Ar...   155   4e-36
ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arab...   153   1e-35
ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-33

>ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74400-like [Vitis vinifera]
          Length = 482

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/138 (59%), Positives = 103/138 (74%), Gaps = 16/138 (11%)
 Frame = -3

Query: 367 DKDLSLYNALLNMYTKCGDIETAKVLFGSMEKKDVTTWTSMITGYAIHGQAKEALALFTT 188
           D DL L N+L+NMY+KCG+I TA+ LF   +KKDVTTWTSMI G+A+HGQA+EAL LFT 
Sbjct: 203 DTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTE 262

Query: 187 MTHTK----------------LVPNDVTFIGVLMACSHVAMVDDGKRYFKSMAKDYGLKP 56
           M  T                 ++PNDVTF+GVLMACSH  +V++GK++F+SM +DY L+P
Sbjct: 263 MKETNKRARKNKRNGEHESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRP 322

Query: 55  RLSHFGCMVDLLCRAGRL 2
           R+SHFGCMVDLLCRAG L
Sbjct: 323 RISHFGCMVDLLCRAGLL 340



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 30/117 (25%), Positives = 61/117 (52%)
 Frame = -3

Query: 352 LYNALLNMYTKCGDIETAKVLFGSMEKKDVTTWTSMITGYAIHGQAKEALALFTTMTHTK 173
           L  +L++MY+  G++  A  +F  +  K++ +WTS+I+ Y  + +  +AL LF  M    
Sbjct: 107 LQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDD 166

Query: 172 LVPNDVTFIGVLMACSHVAMVDDGKRYFKSMAKDYGLKPRLSHFGCMVDLLCRAGRL 2
           + P+ VT    L AC+ +  +D G+ +  +  +  GL   L     ++++  + G +
Sbjct: 167 VQPDIVTVTVALSACADLGALDMGE-WIHAYIRHRGLDTDLCLNNSLINMYSKCGEI 222


>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/138 (59%), Positives = 103/138 (74%), Gaps = 16/138 (11%)
 Frame = -3

Query: 367  DKDLSLYNALLNMYTKCGDIETAKVLFGSMEKKDVTTWTSMITGYAIHGQAKEALALFTT 188
            D DL L N+L+NMY+KCG+I TA+ LF   +KKDVTTWTSMI G+A+HGQA+EAL LFT 
Sbjct: 781  DTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTE 840

Query: 187  MTHTK----------------LVPNDVTFIGVLMACSHVAMVDDGKRYFKSMAKDYGLKP 56
            M  T                 ++PNDVTF+GVLMACSH  +V++GK++F+SM +DY L+P
Sbjct: 841  MKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRP 900

Query: 55   RLSHFGCMVDLLCRAGRL 2
            R+SHFGCMVDLLCRAG L
Sbjct: 901  RISHFGCMVDLLCRAGLL 918



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
 Frame = -3

Query: 349 YNALLNMYTKCGDIETAKVLFGSMEKK----DVTTWTSMITGYAIHGQAKEALALFTTMT 182
           YN L++ Y K G++E A  +   M +K    ++ T++++I GY   G+ + A+ L+T M 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 181 HTKLVPNDVTFIGVLMACSHVAMVDDGKRYFKSMAKDYGLKPRLSHFGCMVDLLCRAGRL 2
              L+P+ V +  ++          +  R  K M ++ GL P +    C++D LC+ GR+
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM-QEAGLHPNVFTLSCLIDGLCKDGRI 524


>ref|NP_177580.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169846|sp|Q9CA73.1|PP119_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g74400 gi|12324820|gb|AAG52382.1|AC011765_34
           hypothetical protein; 20273-21661 [Arabidopsis thaliana]
           gi|332197466|gb|AEE35587.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score =  155 bits (391), Expect = 4e-36
 Identities = 77/126 (61%), Positives = 94/126 (74%), Gaps = 6/126 (4%)
 Frame = -3

Query: 361 DLSLYNALLNMYTKCGDIETAKVLFGSMEKKDVTTWTSMITGYAIHGQAKEALALFTTMT 182
           DL+L N+LLNMY K G+ E A+ LF    +KDVTT+TSMI GYA++GQA+E+L LF  M 
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262

Query: 181 ------HTKLVPNDVTFIGVLMACSHVAMVDDGKRYFKSMAKDYGLKPRLSHFGCMVDLL 20
                  T + PNDVTFIGVLMACSH  +V++GKR+FKSM  DY LKPR +HFGCMVDL 
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322

Query: 19  CRAGRL 2
           CR+G L
Sbjct: 323 CRSGHL 328


>ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
           lyrata] gi|297333380|gb|EFH63798.1| hypothetical protein
           ARALYDRAFT_339633 [Arabidopsis lyrata subsp. lyrata]
          Length = 665

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/126 (60%), Positives = 94/126 (74%), Gaps = 6/126 (4%)
 Frame = -3

Query: 361 DLSLYNALLNMYTKCGDIETAKVLFGSMEKKDVTTWTSMITGYAIHGQAKEALALFTTMT 182
           DL+L N+LLNMY K G+IE A+ LF    +KDVTT+T MI GYA++G+A+E+L LF  M 
Sbjct: 203 DLTLRNSLLNMYVKSGEIEKARKLFDETMRKDVTTYTCMIFGYALNGEAQESLELFKKMK 262

Query: 181 ------HTKLVPNDVTFIGVLMACSHVAMVDDGKRYFKSMAKDYGLKPRLSHFGCMVDLL 20
                  T + PNDVTFIGVLMACSH  +V++GK+YFKSM  DY LKPR +HFGCMVDL 
Sbjct: 263 MIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKQYFKSMIVDYNLKPRDAHFGCMVDLF 322

Query: 19  CRAGRL 2
           CR+G L
Sbjct: 323 CRSGHL 328


>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  144 bits (363), Expect = 7e-33
 Identities = 64/122 (52%), Positives = 92/122 (75%)
 Frame = -3

Query: 367 DKDLSLYNALLNMYTKCGDIETAKVLFGSMEKKDVTTWTSMITGYAIHGQAKEALALFTT 188
           +K++ + N L++MY KCG +E A  +F +ME++ V +W++MI G A HG+A++ALALF  
Sbjct: 277 EKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNK 336

Query: 187 MTHTKLVPNDVTFIGVLMACSHVAMVDDGKRYFKSMAKDYGLKPRLSHFGCMVDLLCRAG 8
           M +T + PN VTFIG+L ACSH+ MV+ G++YF SM +DYG+ PR+ H+GCMVDL  RAG
Sbjct: 337 MINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAG 396

Query: 7   RL 2
            L
Sbjct: 397 LL 398



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/121 (33%), Positives = 68/121 (56%)
 Frame = -3

Query: 364 KDLSLYNALLNMYTKCGDIETAKVLFGSMEKKDVTTWTSMITGYAIHGQAKEALALFTTM 185
           +D+  +N ++    K GD E A  LF  M +++V +WTSMI GYA  G++KEA+ LF  M
Sbjct: 177 RDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEM 236

Query: 184 THTKLVPNDVTFIGVLMACSHVAMVDDGKRYFKSMAKDYGLKPRLSHFGCMVDLLCRAGR 5
               L+PN+VT + VL+AC+ +  +  G+R     +   G +  +     ++D+  + G 
Sbjct: 237 EDAGLLPNEVTVVAVLVACADMGNLVLGRR-IHDFSNRSGYEKNIRVCNTLIDMYVKCGC 295

Query: 4   L 2
           L
Sbjct: 296 L 296


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