BLASTX nr result

ID: Atractylodes22_contig00052836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052836
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                               73   3e-11
ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...    72   6e-11
ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250...    68   7e-10
gb|ABB47037.1| retrotransposon protein, putative, unclassified, ...    60   1e-07
gb|AAL82656.1|AC092387_4 retrotransposon protein, putative, uncl...    60   1e-07

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/77 (48%), Positives = 49/77 (63%)
 Frame = +1

Query: 1    RIHPIFHVSLLRPYYGTPPQSVLALPVDQVADLPTIRPLEVLRSRNIWRWGREIAQILVQ 180
            RIHP+FHVS L+P+ GT     L LP+      P ++P+++L SR I R   +I QILVQ
Sbjct: 1406 RIHPVFHVSQLKPFNGTAQDPYLPLPLTVTEMGPVMQPVKILASRIIIRGHNQIEQILVQ 1465

Query: 181  WESCDVSEATWEDRDHI 231
            WE+    EATWED + I
Sbjct: 1466 WENGLQDEATWEDIEDI 1482


>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/73 (43%), Positives = 43/73 (58%)
 Frame = +1

Query: 1    RIHPIFHVSLLRPYYGTPPQSVLALPVDQVADLPTIRPLEVLRSRNIWRWGREIAQILVQ 180
            +IHP+FH+S L+P+ G  P  V  LP   +   P + P  +   R I R G+E+ QILVQ
Sbjct: 1226 KIHPVFHISALKPFRGPVPDKVYPLPTATMGIHPLLVPAAICAVRTILRQGKEVQQILVQ 1285

Query: 181  WESCDVSEATWED 219
            W + D   ATWED
Sbjct: 1286 WTASDPENATWED 1298


>ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250138 [Vitis vinifera]
          Length = 1406

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/73 (42%), Positives = 43/73 (58%)
 Frame = +1

Query: 1   RIHPIFHVSLLRPYYGTPPQSVLALPVDQVADLPTIRPLEVLRSRNIWRWGREIAQILVQ 180
           +IHP+FH+S  +P+ G  P+ V  LP + +   P +    V   R I R G+E+ QILVQ
Sbjct: 612 KIHPMFHISAFKPFRGPVPEEVYPLPTETMGIHPLLVLAAVCAVRTILRQGKEVQQILVQ 671

Query: 181 WESCDVSEATWED 219
           W + D   ATWED
Sbjct: 672 WTASDPENATWED 684


>gb|ABB47037.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1347

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/75 (42%), Positives = 43/75 (57%)
 Frame = +1

Query: 1    RIHPIFHVSLLRPYYGTPPQSVLALPVDQVADLPTIRPLEVLRSRNIWRWGREIAQILVQ 180
            R+H +FHV LL+P+ G  P + LALP  Q      + P +VLR+    R  R + Q+LVQ
Sbjct: 1227 RLHDVFHVGLLKPFVGVSPSAPLALPPIQHGAAQPV-PRQVLRA----RLARGVRQLLVQ 1281

Query: 181  WESCDVSEATWEDRD 225
            WE    S  +WED D
Sbjct: 1282 WEGLPASATSWEDLD 1296


>gb|AAL82656.1|AC092387_4 retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|20270059|gb|AAM18147.1|AC092172_7
            Putative gag-pol polyprotein [Oryza sativa Japonica
            Group]
          Length = 1338

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/75 (42%), Positives = 43/75 (57%)
 Frame = +1

Query: 1    RIHPIFHVSLLRPYYGTPPQSVLALPVDQVADLPTIRPLEVLRSRNIWRWGREIAQILVQ 180
            R+H +FHV LL+P+ G  P + LALP  Q      + P +VLR+    R  R + Q+LVQ
Sbjct: 1218 RLHDVFHVGLLKPFVGVSPSAPLALPPIQHGAAQPV-PRQVLRA----RLARGVRQLLVQ 1272

Query: 181  WESCDVSEATWEDRD 225
            WE    S  +WED D
Sbjct: 1273 WEGLPASATSWEDLD 1287


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