BLASTX nr result

ID: Atractylodes22_contig00052772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052772
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...   200   1e-49
ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   197   6e-49
ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc...   192   2e-47
ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding...   189   3e-46
ref|XP_002317959.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46

>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Cucumis sativus] gi|449477125|ref|XP_004154937.1|
           PREDICTED: WD repeat and HMG-box DNA-binding protein
           1-like [Cucumis sativus]
          Length = 962

 Score =  200 bits (508), Expect = 1e-49
 Identities = 88/121 (72%), Positives = 107/121 (88%)
 Frame = -1

Query: 365 RGSITGIAFDPNSEYLASVDSVGTVMIWELHSGATVHTLRNVAPNASSDFSTLSALGWSP 186
           +G++TG+AFDPNSEYLASVDS+GTV+IWEL SG+ +H L+ +APN  SD S ++ LGWSP
Sbjct: 147 KGAVTGLAFDPNSEYLASVDSIGTVIIWELQSGSIIHNLKGIAPNTGSDPSVMNVLGWSP 206

Query: 185 DGEMLAVSGLKNDVVMYDRDTAEKLFTLRGDHTTPVCFLAWSLNGKYIATSGIDRQVLIW 6
           DGE LAV GL+NDVVMYDRDTAEKLF+LRGDHT P+CFL+WS NGKY+ATS +DRQ+LIW
Sbjct: 207 DGETLAVPGLRNDVVMYDRDTAEKLFSLRGDHTQPICFLSWSPNGKYMATSSLDRQILIW 266

Query: 5   D 3
           D
Sbjct: 267 D 267


>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score =  197 bits (502), Expect = 6e-49
 Identities = 87/121 (71%), Positives = 105/121 (86%)
 Frame = -1

Query: 365 RGSITGIAFDPNSEYLASVDSVGTVMIWELHSGATVHTLRNVAPNASSDFSTLSALGWSP 186
           +GS+TG+AFDPN EYLASVDS+GTV+ WELHSG  +H L+ +AP+  SD S L+AL WSP
Sbjct: 145 KGSVTGLAFDPNGEYLASVDSIGTVIQWELHSGTALHILKGIAPDTGSDLSVLNALSWSP 204

Query: 185 DGEMLAVSGLKNDVVMYDRDTAEKLFTLRGDHTTPVCFLAWSLNGKYIATSGIDRQVLIW 6
           DGE LAV GL+NDVVMYDRDTAEKLF+LRGDH  P+CFL+WS NGKY+AT+G+DRQ+LIW
Sbjct: 205 DGETLAVPGLRNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATAGLDRQILIW 264

Query: 5   D 3
           D
Sbjct: 265 D 265


>ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula]
           gi|355484738|gb|AES65941.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 991

 Score =  192 bits (489), Expect = 2e-47
 Identities = 84/121 (69%), Positives = 102/121 (84%)
 Frame = -1

Query: 365 RGSITGIAFDPNSEYLASVDSVGTVMIWELHSGATVHTLRNVAPNASSDFSTLSALGWSP 186
           +G +TG+AFDPN EYLAS+DS+GTV+IWELHSG  +H L+ +AP+   D  T++ L WSP
Sbjct: 146 KGPVTGLAFDPNGEYLASLDSIGTVIIWELHSGKNLHNLKGIAPDTGLDLLTMNVLCWSP 205

Query: 185 DGEMLAVSGLKNDVVMYDRDTAEKLFTLRGDHTTPVCFLAWSLNGKYIATSGIDRQVLIW 6
           DGE LA+ GLKNDVVMYDRDTAEKLFTLRGDHT P+CFL WS NGKY+ATS +D+Q+LIW
Sbjct: 206 DGETLAIPGLKNDVVMYDRDTAEKLFTLRGDHTQPICFLCWSPNGKYMATSSLDKQILIW 265

Query: 5   D 3
           D
Sbjct: 266 D 266


>ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 972

 Score =  189 bits (479), Expect = 3e-46
 Identities = 85/121 (70%), Positives = 101/121 (83%)
 Frame = -1

Query: 365 RGSITGIAFDPNSEYLASVDSVGTVMIWELHSGATVHTLRNVAPNASSDFSTLSALGWSP 186
           +GSITG+AFDPN EYLAS+DS GTV++WEL SG  +H L+ +AP+   D ST++ L WSP
Sbjct: 146 KGSITGLAFDPNGEYLASLDSTGTVILWELQSGKIIHNLKGIAPDTGLDVSTMNVLCWSP 205

Query: 185 DGEMLAVSGLKNDVVMYDRDTAEKLFTLRGDHTTPVCFLAWSLNGKYIATSGIDRQVLIW 6
           DGE LAV GLKNDVVMYDRDTAEK+ +LRGDH  P+CFL WS NGKYIA+SG+DRQVLIW
Sbjct: 206 DGETLAVPGLKNDVVMYDRDTAEKVLSLRGDHIQPICFLCWSPNGKYIASSGLDRQVLIW 265

Query: 5   D 3
           D
Sbjct: 266 D 266


>ref|XP_002317959.1| predicted protein [Populus trichocarpa] gi|222858632|gb|EEE96179.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  189 bits (479), Expect = 3e-46
 Identities = 85/121 (70%), Positives = 103/121 (85%)
 Frame = -1

Query: 365 RGSITGIAFDPNSEYLASVDSVGTVMIWELHSGATVHTLRNVAPNASSDFSTLSALGWSP 186
           +G +TG+AFDP +EYLA+VDSVGTV+ WEL SG  +HTL+ VAPN  SD S ++ + WSP
Sbjct: 29  KGPVTGLAFDPINEYLATVDSVGTVLFWELQSGGILHTLKGVAPNIISDTSFMNVVSWSP 88

Query: 185 DGEMLAVSGLKNDVVMYDRDTAEKLFTLRGDHTTPVCFLAWSLNGKYIATSGIDRQVLIW 6
           DGE LAV GL+NDVVMYDRDTAEKLF+LRGDH  PVC+L+WS NGKY+ATSG+DRQ+LIW
Sbjct: 89  DGETLAVPGLRNDVVMYDRDTAEKLFSLRGDHVQPVCYLSWSPNGKYMATSGLDRQILIW 148

Query: 5   D 3
           D
Sbjct: 149 D 149


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