BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052757
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    64   1e-08
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    63   3e-08
ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 ...    56   4e-06

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
 Frame = +3

Query: 15  RTQVMKFGIGKRTVTLKGDPTLGRSLVSLKSLGKTISQEGYGLLVE--------LGAVXX 170
           +TQ M F +G    TL GDPTL RS VSLK++ +T+ +EG GL +E         G++  
Sbjct: 586 KTQKMSFQLGGVPYTLTGDPTLARSKVSLKAMLRTLRKEGGGLWLECNQVEAGGAGSIRD 645

Query: 171 XXXXXXXXXXMIGLLKEFTEVFDLPNQLPPSRGKEHSI 284
                     +  L++ F  VF+ P  LPP RG EH+I
Sbjct: 646 SKVEQEIPPFLQELMRRFEGVFETPVGLPPRRGHEHAI 683


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
 Frame = +3

Query: 15  RTQVMKFGIGKRTVTLKGDPTLGRSLVSLKSLGKTISQEGYGLLVELGAVXXXXXXXXXX 194
           +TQ +++  G  TVTL+G+P L R+ VSLK++ +T+ +EG G LV+L  +          
Sbjct: 522 KTQTLQYKEGNETVTLRGNPALSRTEVSLKAMYRTLRKEGGGFLVDLNQMASHEGLPREL 581

Query: 195 XXMIG----LLKEFTEVFDLPNQLPPSRGKEHSI 284
             +      LL  + +VF++P  LPP RG  H+I
Sbjct: 582 PEVPSCLQPLLSSYQQVFNMPLGLPPDRGHVHAI 615


>ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 553

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
 Frame = +3

Query: 6   IDRRTQVMKFGIGKRTVTLKGDPTLGRSLVSLKSLGKTISQEGYGLLVELGAVXXXXXXX 185
           +D R   M    G+RT+ LKGDP L ++ VSLKS+ K+ ++   G L+E  ++       
Sbjct: 45  VDWRNLSMNLCPGERTIKLKGDPILTKARVSLKSMMKSWTETYQGYLIERYSMEMEREIS 104

Query: 186 XXXXXMIG-----------LLKEFTEVFDLPNQLPPSRGKEHSI 284
                 IG           LL +F +VF +P +LPP R  EH I
Sbjct: 105 SAEWYGIGEVHSVSQAISTLLHQFEDVFQMPEELPPRREIEHHI 148