BLASTX nr result

ID: Atractylodes22_contig00052574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052574
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241...   119   3e-25
emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]   119   3e-25
ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinu...   113   2e-23
ref|XP_003608039.1| La-related protein [Medicago truncatula] gi|...   109   3e-22
ref|XP_003528499.1| PREDICTED: uncharacterized protein LOC100796...    93   2e-17

>ref|XP_002281817.1| PREDICTED: uncharacterized protein LOC100241743 [Vitis vinifera]
           gi|297741333|emb|CBI32464.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/89 (67%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
 Frame = -3

Query: 286 PNSAETVVDNNAEENS---KKGWARGRGKSKSRTPTHNSRGLLAPSPQTSSSVHLEASST 116
           PN+ E V+++NAEENS   KKGWARGRGK + RT   + RGLLAPSPQ+S S   EAS+ 
Sbjct: 319 PNNTELVIESNAEENSSGSKKGWARGRGKPRGRTQITSGRGLLAPSPQSSGSNQFEASA- 377

Query: 115 KQSAKGPRMPDGTRGFTMGRGKPISSPPI 29
           KQ  KGPRMPDGTRGFTMGRGKPIS+P +
Sbjct: 378 KQITKGPRMPDGTRGFTMGRGKPISTPAL 406


>emb|CAN81423.1| hypothetical protein VITISV_035943 [Vitis vinifera]
          Length = 941

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/89 (67%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
 Frame = -3

Query: 286 PNSAETVVDNNAEENS---KKGWARGRGKSKSRTPTHNSRGLLAPSPQTSSSVHLEASST 116
           PN+ E V+++NAEENS   KKGWARGRGK + RT   + RGLLAPSPQ+S S   EAS+ 
Sbjct: 303 PNNTELVIESNAEENSSGSKKGWARGRGKPRGRTQITSGRGLLAPSPQSSGSNQFEASA- 361

Query: 115 KQSAKGPRMPDGTRGFTMGRGKPISSPPI 29
           KQ  KGPRMPDGTRGFTMGRGKPIS+P +
Sbjct: 362 KQITKGPRMPDGTRGFTMGRGKPISTPAL 390


>ref|XP_002521842.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223538880|gb|EEF40478.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 440

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/94 (58%), Positives = 71/94 (75%), Gaps = 3/94 (3%)
 Frame = -3

Query: 289 QPNSAETVVDNNAEENS---KKGWARGRGKSKSRTPTHNSRGLLAPSPQTSSSVHLEASS 119
           Q N+ E+V ++N EENS   KKGWA+GRGK + R  +H  RGLLAPSPQ+ SS   EAS+
Sbjct: 346 QVNNVESVTESNTEENSGSSKKGWAKGRGKGRGRGQSHGGRGLLAPSPQSVSSPQCEASA 405

Query: 118 TKQSAKGPRMPDGTRGFTMGRGKPISSPPILTGI 17
            K ++KGPRMPDGTRGFTMGRGKP+ +P + + +
Sbjct: 406 -KHTSKGPRMPDGTRGFTMGRGKPLGTPTLASSM 438


>ref|XP_003608039.1| La-related protein [Medicago truncatula]
           gi|355509094|gb|AES90236.1| La-related protein [Medicago
           truncatula]
          Length = 442

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/87 (64%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
 Frame = -3

Query: 286 PNSAETVVDNNAEENS---KKGWARGRGKSKSRTPTHNSRGLLAPSPQTSSSVHLEASST 116
           PN+ E  V++N +E S   KKGW RGRGK + RT  H  RGLLAP P  SSSV L   ST
Sbjct: 352 PNNTELCVESNGDETSVGSKKGWTRGRGKGRGRTQNHTGRGLLAP-PSPSSSVVLGEVST 410

Query: 115 KQSAKGPRMPDGTRGFTMGRGKPISSP 35
           K +AKGPRMPDGTRGF +GRGKPISSP
Sbjct: 411 KPNAKGPRMPDGTRGFAIGRGKPISSP 437


>ref|XP_003528499.1| PREDICTED: uncharacterized protein LOC100796786 [Glycine max]
          Length = 399

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 51/82 (62%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = -3

Query: 283 NSAETVVDNNAEENSKKGWA-RGRGKSKSRTPTHNSRGLLAPSPQTSSSVHLEASSTKQS 107
           N+AE + D N +EN KKGWA RGRGK + RT     RGLLAP  Q+SS++  +A  TK +
Sbjct: 313 NNAE-LFDTNVDENCKKGWASRGRGKGRGRT---QGRGLLAPPSQSSSTILCDAH-TKPN 367

Query: 106 AKGPRMPDGTRGFTMGRGKPIS 41
            KGP+MPDGTRGFTMGRGKPIS
Sbjct: 368 TKGPKMPDGTRGFTMGRGKPIS 389


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