BLASTX nr result

ID: Atractylodes22_contig00052573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052573
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530166.1| conserved hypothetical protein [Ricinus comm...   147   1e-33
emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]   139   2e-31
ref|XP_002281204.1| PREDICTED: uncharacterized protein LOC100266...   138   5e-31
ref|XP_002323401.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
ref|XP_002309400.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29

>ref|XP_002530166.1| conserved hypothetical protein [Ricinus communis]
           gi|223530327|gb|EEF32221.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score =  147 bits (370), Expect = 1e-33
 Identities = 79/116 (68%), Positives = 92/116 (79%), Gaps = 3/116 (2%)
 Frame = +1

Query: 13  HTKGQNRKTMSRRNXXXXXXSKLDLKLNLSPPRTHRPMMELPNQSTTMSPTS---SCLSS 183
           +TK   +KTMSRRN       KLDLKLNLSPPR   P +E PN+S T+SPTS   SC+SS
Sbjct: 78  YTKNTRKKTMSRRNGNGP---KLDLKLNLSPPRAD-PRVESPNRSATVSPTSPPSSCVSS 133

Query: 184 ELVRDETGLRYSTSPEATSMMLVGCPRCLMYIMLSEDYPKCPKCKSTVLLDVVNDN 351
           EL +D+T LRYS SPEATSM+LVGCPRCLMY+MLSED PKCPKCKSTVLLD +++N
Sbjct: 134 ELNQDDT-LRYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 188


>emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]
          Length = 281

 Score =  139 bits (350), Expect = 2e-31
 Identities = 79/125 (63%), Positives = 92/125 (73%), Gaps = 9/125 (7%)
 Frame = +1

Query: 4   WKIHTKGQNRK------TMSRRNXXXXXXSKLDLKLNLSPPRTHRPMMELPNQSTTMSPT 165
           W+ H   Q ++       MSRRN       KLDLKLNLSPPR +R   E P++S T+SPT
Sbjct: 144 WERHPLPQGKRYLGDATRMSRRNGP-----KLDLKLNLSPPRANRHA-ESPSRSATLSPT 197

Query: 166 S---SCLSSELVRDETGLRYSTSPEATSMMLVGCPRCLMYIMLSEDYPKCPKCKSTVLLD 336
           S   SC+SSEL +DET LRYS SPEATSM+LVGCPRCLMY+MLSED PKCPKCKSTVLLD
Sbjct: 198 SPPSSCVSSELNQDET-LRYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLD 256

Query: 337 VVNDN 351
            ++DN
Sbjct: 257 FLHDN 261


>ref|XP_002281204.1| PREDICTED: uncharacterized protein LOC100266492 [Vitis vinifera]
          Length = 120

 Score =  138 bits (347), Expect = 5e-31
 Identities = 76/107 (71%), Positives = 86/107 (80%), Gaps = 3/107 (2%)
 Frame = +1

Query: 40  MSRRNXXXXXXSKLDLKLNLSPPRTHRPMMELPNQSTTMSPTS---SCLSSELVRDETGL 210
           MSRRN       KLDLKLNLSPPR +R   E P++S T+SPTS   SC+SSEL +DET L
Sbjct: 1   MSRRNGP-----KLDLKLNLSPPRANRHA-ESPSRSATLSPTSPPSSCVSSELNQDET-L 53

Query: 211 RYSTSPEATSMMLVGCPRCLMYIMLSEDYPKCPKCKSTVLLDVVNDN 351
           RYS SPEATSM+LVGCPRCLMY+MLSED PKCPKCKSTVLLD ++DN
Sbjct: 54  RYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHDN 100


>ref|XP_002323401.1| predicted protein [Populus trichocarpa] gi|222868031|gb|EEF05162.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  133 bits (335), Expect = 1e-29
 Identities = 72/107 (67%), Positives = 86/107 (80%), Gaps = 3/107 (2%)
 Frame = +1

Query: 40  MSRRNXXXXXXSKLDLKLNLSPPRTHRPMMELPNQSTTMSPTS---SCLSSELVRDETGL 210
           MSRRN       KLDLKLNLSPPR + P +E P +S T+SPTS   SC+SSE+ +D+T L
Sbjct: 1   MSRRNGSLP---KLDLKLNLSPPRVN-PRVESPGRSATVSPTSPPSSCVSSEMSQDDT-L 55

Query: 211 RYSTSPEATSMMLVGCPRCLMYIMLSEDYPKCPKCKSTVLLDVVNDN 351
           RYS+SPEATSM+LVGCPRCLMY+MLSE+ PKCPKCKST LLD ++DN
Sbjct: 56  RYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSTWLLDFLHDN 102


>ref|XP_002309400.1| predicted protein [Populus trichocarpa] gi|222855376|gb|EEE92923.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score =  132 bits (332), Expect = 3e-29
 Identities = 72/107 (67%), Positives = 84/107 (78%), Gaps = 3/107 (2%)
 Frame = +1

Query: 40  MSRRNXXXXXXSKLDLKLNLSPPRTHRPMMELPNQSTTMSPTS---SCLSSELVRDETGL 210
           MSRRN       KLDLKLNLSPPR + P +E P +S T+SPTS   SC+SSE   D+  L
Sbjct: 1   MSRRNGSLP---KLDLKLNLSPPRVN-PRVESPGRSATVSPTSPPSSCVSSERSHDDA-L 55

Query: 211 RYSTSPEATSMMLVGCPRCLMYIMLSEDYPKCPKCKSTVLLDVVNDN 351
           RYS+SPEATSM+LVGCPRCLMY+MLSE+ PKCPKCKSTVLLD ++DN
Sbjct: 56  RYSSSPEATSMVLVGCPRCLMYVMLSENDPKCPKCKSTVLLDFLHDN 102


Top