BLASTX nr result

ID: Atractylodes22_contig00052526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052526
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    82   4e-14
ref|XP_002522567.1| conserved hypothetical protein [Ricinus comm...    72   4e-11
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    72   4e-11
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    69   3e-10
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]    69   3e-10

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 29/141 (20%)
 Frame = +3

Query: 6   IKAEIRLMNPLTLSEAMEMASKIEVKNRLIGKER-----GS-TFFRRNMGSSGEIKSTAS 167
           +++EIR++NP  L +AME+A K+E +NR+ G  R     GS + + R   S+  + S   
Sbjct: 302 LQSEIRVLNPYNLDQAMELALKLEERNRVNGARRTGPRSGSFSIYNRGPNSNPSLPSVYG 361

Query: 168 SVGSQNKSD-----NKQGST------------------YRRLSDEEVQHRRALGLCYRCD 278
           S G  N S      N   S                    RRL+++E+Q +RA GLC++CD
Sbjct: 362 SQGGSNASTKSWAINSNASQTSVNNAKPPPLSSRGFGEMRRLTEKELQEKRAKGLCFKCD 421

Query: 279 EKFSPGHKCKNKEVSVLLVQE 341
           EK+  GH+C+ KE+SVL +++
Sbjct: 422 EKWGVGHQCRRKELSVLFMED 442


>ref|XP_002522567.1| conserved hypothetical protein [Ricinus communis]
           gi|223538258|gb|EEF39867.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/108 (35%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
 Frame = +3

Query: 6   IKAEIRLMNPLTLSEAMEMASKIEVKNRLIGKERGSTFFRRNMGSSGEIKSTASS----- 170
           I+ ++++  P TL++A+ +   +E +NRL  K    + F+    +S +I ST++S     
Sbjct: 66  IRLDVKIKQPKTLADAIGVTRLVEERNRLQKKSPDPSRFQPATTAS-KINSTSASGVLGP 124

Query: 171 --VGSQNKSDNKQGSTYRRLSDEEVQHRRALGLCYRCDEKFSPGHKCK 308
             V   N + N   +T+RR++++EV+ R+  GLCY CDEKF+PGH+C+
Sbjct: 125 RPVQRGNPNANANPTTFRRITNQEVRERQEKGLCYYCDEKFTPGHRCQ 172


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
 Frame = +3

Query: 6    IKAEIRLMNPLTLSEAMEMASKIEVKNRLIGKERG----------STFFRRNMGSSGEIK 155
            I+AE RL+ P  L   MEMA ++E +N  +   R           ST  R         +
Sbjct: 898  IRAEQRLLQPYGLGHLMEMAQRVEDRNLAMRAAREPNGPKSTKMLSTANRGEWKIGENFQ 957

Query: 156  STASSVGSQNKSDNKQGSTYRRLSDEEVQHRRALGLCYRCDEKFSPGHKCKNKEVSVLLV 335
            + A +VG +  S  ++    +RL++ E+Q RR  GL ++C+EKFSPGH+CK KE+ VLLV
Sbjct: 958  TRAVAVGEKTMSQRRE-IPIKRLTESELQARREKGLWFKCEEKFSPGHRCK-KELRVLLV 1015

Query: 336  QE 341
             E
Sbjct: 1016 HE 1017


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 38/152 (25%)
 Frame = +3

Query: 6   IKAEIRLMNPLTLSEAMEMASKIEVKNRLIGKER----GSTFFRRNMGS----------- 140
           IK E+R+M P +L  AME+A ++E K     K++     S++   N  S           
Sbjct: 227 IKNEVRIMGPSSLDHAMELAVQVEEKLNHRPKKKWESKASSYSAHNPNSYIPKPTLSAKP 286

Query: 141 ------------------SGEIKSTASSVGSQNKSDN-----KQGSTYRRLSDEEVQHRR 251
                                   +++S+ S NK        K     RRLS++E+Q++R
Sbjct: 287 TYSFNYPTQTHNTPYNQFPAPSHHSSTSINSPNKPKTTLPIAKPFGEIRRLSEKELQYKR 346

Query: 252 ALGLCYRCDEKFSPGHKCKNKEVSVLLVQEAD 347
             GLC+RCDEK++ GH+CK KE+S+LL  E +
Sbjct: 347 EHGLCFRCDEKWAIGHRCKKKELSILLGHEEE 378


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
 Frame = +3

Query: 6   IKAEIRLMNPLTLSEAMEMASKIEVKNRLIGKERGSTFFR-RNMGSSGEIKSTASSVGS- 179
           I+ ++++  P TL++ + +A  IE +N+L  K    T F+  ++        TA  +G  
Sbjct: 210 IRIDVKIKQPRTLADTIGVARLIEERNQLQRKPTQQTRFQPASVTPKASPNPTAGVLGPP 269

Query: 180 ----QNKSDNKQGSTYRRLSDEEVQHRRALGLCYRCDEKFSPGHKCKNKEVSVL 329
                N+S N Q +T+ R++++E + RR  GLCY CDEKF  GH+C+  ++ ++
Sbjct: 270 PTQHMNQSSNAQPATFHRITNQEARERREKGLCYYCDEKFVAGHRCERPQLFMI 323


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