BLASTX nr result

ID: Atractylodes22_contig00052512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052512
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    60   2e-07
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    57   2e-06
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    55   5e-06

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/42 (59%), Positives = 30/42 (71%)
 Frame = -2

Query: 127 PIGEIRRLTXXXXXXXXXKGLCFRCDDKWQIGHRCKRRELNI 2
           P GEIRRL+          GLCFRCD+KW IGHRCK++EL+I
Sbjct: 330 PFGEIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSI 371


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/84 (35%), Positives = 45/84 (53%)
 Frame = -2

Query: 253 GTGTRTGNWIPNTSSITTAGKESMETKPTQGLRVRGERSQFNPIGEIRRLTXXXXXXXXX 74
           G+   T +W  N++    A + S+       L  RG        GE+RRLT         
Sbjct: 365 GSNASTKSWAINSN----ASQTSVNNAKPPPLSSRG-------FGEMRRLTEKELQEKRA 413

Query: 73  KGLCFRCDDKWQIGHRCKRRELNI 2
           KGLCF+CD+KW +GH+C+R+EL++
Sbjct: 414 KGLCFKCDEKWGVGHQCRRKELSV 437


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = -2

Query: 127 PIGEIRRLTXXXXXXXXXKGLCFRCDDKWQIGHRCKRRELNI 2
           P GEIRRL+         +GLCFRCDDKW +GHRCK +EL++
Sbjct: 287 PYGEIRRLSEKELQHKRERGLCFRCDDKWSVGHRCK-KELSV 327


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