BLASTX nr result

ID: Atractylodes22_contig00052504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052504
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...   112   2e-23
ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...   104   8e-21

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/102 (57%), Positives = 78/102 (76%)
 Frame = +2

Query: 2    NILIFHLFASRNSVCVDMVLDEIQEKGLEFDSVTYNFLVYGFFRCKAVSRSLQYLTAMMS 181
            NILI+HLF + NS+ V ++L E+ +KGL FD VTYNFLVYGF + K V  S+QYLTAM+S
Sbjct: 938  NILIYHLFQTGNSLLVKVILGELHKKGLLFDEVTYNFLVYGFLQSKDVPTSVQYLTAMIS 997

Query: 182  KELKPSNRCLRALITSLRSGGEVKNVLKLSQEMETRSWVHCS 307
            KEL+PS+R LRA+I+ L   G ++  L+LS+EME R W+H S
Sbjct: 998  KELRPSSRNLRAVISCLCDSGMLRKALELSREMELRGWIHGS 1039


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Vitis vinifera]
          Length = 1273

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/102 (57%), Positives = 78/102 (76%)
 Frame = +2

Query: 2    NILIFHLFASRNSVCVDMVLDEIQEKGLEFDSVTYNFLVYGFFRCKAVSRSLQYLTAMMS 181
            NILI+HLF + NS+ V ++L E+ +KGL FD VTYNFLVYGF + K V  S+QYLTAM+S
Sbjct: 955  NILIYHLFQTGNSLLVKVILGELHKKGLLFDEVTYNFLVYGFLQSKDVPTSVQYLTAMIS 1014

Query: 182  KELKPSNRCLRALITSLRSGGEVKNVLKLSQEMETRSWVHCS 307
            KEL+PS+R LRA+I+ L   G ++  L+LS+EME R W+H S
Sbjct: 1015 KELRPSSRNLRAVISCLCDSGMLRKALELSREMELRGWIHGS 1056


>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/104 (52%), Positives = 74/104 (71%)
 Frame = +2

Query: 2    NILIFHLFASRNSVCVDMVLDEIQEKGLEFDSVTYNFLVYGFFRCKAVSRSLQYLTAMMS 181
            NILIFHL ++ N + V  VLDE+QEKGL  + VTYNFLVYGF +CK V+  + Y++ M+S
Sbjct: 876  NILIFHLLSAGNCLHVVRVLDELQEKGLLLNEVTYNFLVYGFSKCKDVASVVHYMSTMIS 935

Query: 182  KELKPSNRCLRALITSLRSGGEVKNVLKLSQEMETRSWVHCSKV 313
            K  KP+NR +R  +T +   G++  VL+LSQEME R W+H S V
Sbjct: 936  KGFKPNNRSIRTAVTCMCDLGQLSEVLELSQEMEKRGWIHGSFV 979


>ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Glycine max]
          Length = 1186

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/104 (51%), Positives = 72/104 (69%)
 Frame = +2

Query: 2    NILIFHLFASRNSVCVDMVLDEIQEKGLEFDSVTYNFLVYGFFRCKAVSRSLQYLTAMMS 181
            NIL+F+L    NS+ V+ +L E++EK +  D V +NFLVYGF +C+ +S SL YLT M+S
Sbjct: 871  NILMFYLLKDGNSLDVNKILTEMEEKKVVLDEVGHNFLVYGFLQCRDLSSSLHYLTTMIS 930

Query: 182  KELKPSNRCLRALITSLRSGGEVKNVLKLSQEMETRSWVHCSKV 313
            K LKPSNR LR +I+ L   G +K  LKLSQEM  R W+H S +
Sbjct: 931  KGLKPSNRSLRKVISKLCDAGNLKKALKLSQEMRLRGWMHDSSI 974


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
            predicted protein [Populus trichocarpa]
          Length = 1158

 Score =  104 bits (259), Expect = 8e-21
 Identities = 52/99 (52%), Positives = 71/99 (71%)
 Frame = +2

Query: 2    NILIFHLFASRNSVCVDMVLDEIQEKGLEFDSVTYNFLVYGFFRCKAVSRSLQYLTAMMS 181
            NILIF+L  +  S+ V  VL+E+QE+GL  + VTYNFLVYGF +CK VS  + YL+ M+S
Sbjct: 836  NILIFYLLTAGESMHVKKVLNELQEEGLVLNEVTYNFLVYGFSKCKDVSTGMHYLSTMIS 895

Query: 182  KELKPSNRCLRALITSLRSGGEVKNVLKLSQEMETRSWV 298
            KEL+PS R L  +IT L   GE+  VL+LS+E+E + W+
Sbjct: 896  KELRPSYRSLSTVITFLCDIGELDKVLELSREIELKGWI 934


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