BLASTX nr result

ID: Atractylodes22_contig00052490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052490
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    57   1e-06
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/83 (36%), Positives = 50/83 (60%)
 Frame = -1

Query: 249 VENAQFKVDTSLNDTNLRMDLASQLLAYQEAVRDEESFYKQRSKEHWLRLGDANTAFFHK 70
           ++ AQ  + T+  +  L M     +  Y   VR EESF+KQ+++  WL LGD NT++FHK
Sbjct: 281 MDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHK 340

Query: 69  SVKDKNSRHRVEAVFGTDDIYVE 1
           SV  +++R+++ ++   D   VE
Sbjct: 341 SVNGRHNRNKLLSLTREDGEVVE 363


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
 Frame = -1

Query: 252 TVENAQFKVDTSLNDTNL-RMDLASQLLAYQEAVRDEESFYKQRSKEHWLRLGDANTAFF 76
           T+E+ + ++D +  D +  R ++    L  +EA RDEE ++ Q+S+  W++LGD N+ FF
Sbjct: 80  TIEDLKAELDVAQRDDDRSREEITELTLRLKEAYRDEEQYWYQKSRSLWMKLGDNNSKFF 139

Query: 75  HKSVKDKNSRHRVEAVFGTDDIY 7
           H   K + +R+R+  +   + I+
Sbjct: 140 HALTKQRRARNRITGLHDENGIW 162


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/83 (36%), Positives = 49/83 (59%)
 Frame = -1

Query: 249 VENAQFKVDTSLNDTNLRMDLASQLLAYQEAVRDEESFYKQRSKEHWLRLGDANTAFFHK 70
           ++ AQ  + T+  +  L M     +  Y   VR EESF+KQ+++  WL LGD NT++FHK
Sbjct: 687 MDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHK 746

Query: 69  SVKDKNSRHRVEAVFGTDDIYVE 1
           SV  + +R+++ ++   D   VE
Sbjct: 747 SVNGRQNRNKLLSLTREDGEVVE 769


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