BLASTX nr result

ID: Atractylodes22_contig00052419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052419
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516460.1| pollen specific protein sf21, putative [Rici...   108   5e-22
ref|XP_002277611.1| PREDICTED: pollen-specific protein SF21 [Vit...   107   8e-22
ref|XP_002309507.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_004135699.1| PREDICTED: pollen-specific protein SF21-like...   101   7e-20
ref|XP_002324168.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20

>ref|XP_002516460.1| pollen specific protein sf21, putative [Ricinus communis]
           gi|223544280|gb|EEF45801.1| pollen specific protein
           sf21, putative [Ricinus communis]
          Length = 347

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/62 (85%), Positives = 57/62 (91%)
 Frame = -2

Query: 187 MADSSDSVSIDMETSSLAGKEHLVKTSYGFVSVAICGDQDKPALVTYPDLALNHMSCFQG 8
           MADSSDSVSIDMET SLAGKE LVKT +G VSV++ GDQDKPAL+TYPDLALNHMSCFQG
Sbjct: 1   MADSSDSVSIDMETLSLAGKEFLVKTCHGCVSVSVYGDQDKPALITYPDLALNHMSCFQG 60

Query: 7   LF 2
           LF
Sbjct: 61  LF 62


>ref|XP_002277611.1| PREDICTED: pollen-specific protein SF21 [Vitis vinifera]
           gi|296081622|emb|CBI20627.3| unnamed protein product
           [Vitis vinifera]
          Length = 344

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/62 (85%), Positives = 56/62 (90%)
 Frame = -2

Query: 187 MADSSDSVSIDMETSSLAGKEHLVKTSYGFVSVAICGDQDKPALVTYPDLALNHMSCFQG 8
           MADSSDSVSIDMET SL GKEHLVKTS G VSV++ GD DKPALVTYPDLALNH+SCFQG
Sbjct: 1   MADSSDSVSIDMETISLGGKEHLVKTSKGSVSVSVFGDPDKPALVTYPDLALNHLSCFQG 60

Query: 7   LF 2
           LF
Sbjct: 61  LF 62


>ref|XP_002309507.1| predicted protein [Populus trichocarpa] gi|222855483|gb|EEE93030.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/62 (79%), Positives = 57/62 (91%)
 Frame = -2

Query: 187 MADSSDSVSIDMETSSLAGKEHLVKTSYGFVSVAICGDQDKPALVTYPDLALNHMSCFQG 8
           M DSSDSVSIDMET SL+GKE++V+T  G+VSV++ GDQDKPALVTYPDLALNH+SCFQG
Sbjct: 1   MGDSSDSVSIDMETPSLSGKEYVVETCCGYVSVSVYGDQDKPALVTYPDLALNHISCFQG 60

Query: 7   LF 2
           LF
Sbjct: 61  LF 62


>ref|XP_004135699.1| PREDICTED: pollen-specific protein SF21-like [Cucumis sativus]
          Length = 344

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/62 (75%), Positives = 52/62 (83%)
 Frame = -2

Query: 187 MADSSDSVSIDMETSSLAGKEHLVKTSYGFVSVAICGDQDKPALVTYPDLALNHMSCFQG 8
           MADS+DSVS+DME   L GKEH V+T  G VSV +CGDQDKP L+TYPDLALNHMSCFQG
Sbjct: 1   MADSNDSVSVDMEKIYLGGKEHHVRTGQGSVSVIVCGDQDKPPLITYPDLALNHMSCFQG 60

Query: 7   LF 2
           LF
Sbjct: 61  LF 62


>ref|XP_002324168.1| predicted protein [Populus trichocarpa] gi|222865602|gb|EEF02733.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/61 (77%), Positives = 55/61 (90%)
 Frame = -2

Query: 187 MADSSDSVSIDMETSSLAGKEHLVKTSYGFVSVAICGDQDKPALVTYPDLALNHMSCFQG 8
           M DSSDS+SIDMET SL+GKE++++T YG VSV++ GDQDKPALVTYPDLALNH SCFQG
Sbjct: 1   MGDSSDSLSIDMETPSLSGKEYVIETCYGHVSVSVYGDQDKPALVTYPDLALNHTSCFQG 60

Query: 7   L 5
           L
Sbjct: 61  L 61


Top