BLASTX nr result

ID: Atractylodes22_contig00052418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052418
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281...   134   8e-30
ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...   131   5e-29
emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]   131   5e-29
ref|XP_002298147.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003543825.1| PREDICTED: transcription factor GAMYB-like [...   125   5e-27

>ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281634|gb|ABM53274.1|
           GAMYB-like2 [Solanum lycopersicum]
          Length = 504

 Score =  134 bits (337), Expect = 8e-30
 Identities = 88/165 (53%), Positives = 104/165 (63%), Gaps = 10/165 (6%)
 Frame = +2

Query: 2   QNLNGDIPXXXXXXXXXXHAFLNGNTSSSEPISRATKLELPSLQYSTQVGSCGAPSSPLP 181
           QNL  D            HA LNG+TSSSEP S A KLELPSLQ  + + S G  +SPLP
Sbjct: 293 QNLTSDYHPSSLGVIPGSHALLNGHTSSSEP-SWAKKLELPSLQ--STIASWGLVTSPLP 349

Query: 182 SLESVGTMIQLPLMVDS----LSPKNSGMLEAVLHESQTLKISRS---NNNSNALVMPHD 340
           SL+SV T+IQ P    +    LSP+NSG+L+AVLHESQT+K S+S     NS       D
Sbjct: 350 SLDSVDTLIQSPPTEHTESCNLSPRNSGLLDAVLHESQTMKASKSILHQENSG------D 403

Query: 341 VTDSSSQNL---VWEADGDPISPLAYSAASVFSEYTPISGSSLDE 466
           V D+S  +L    W   GDPISPL +SAASVFSEYTP SGSS +E
Sbjct: 404 VVDNSCPDLHMTEWGQHGDPISPLGHSAASVFSEYTPTSGSSSEE 448


>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  131 bits (330), Expect = 5e-29
 Identities = 78/156 (50%), Positives = 103/156 (66%), Gaps = 13/156 (8%)
 Frame = +2

Query: 56  HAFLNGNTSSSEPISRATKLELPSLQY-STQVGSCGAPSSPLPSLESVGTMIQLP----L 220
           HA LNGN S+S+PIS   KLELPSLQY  T +G  G  SSP P LESV   IQ P    +
Sbjct: 300 HALLNGNFSASKPISGPVKLELPSLQYLETDLGGWGTSSSPPPLLESVDAFIQSPPSGTV 359

Query: 221 MVDSLSPKNSGMLEAVLHESQTLKISRSN----NNSNALVMPHDVTDS--SSQNLVWEAD 382
            ++ LSP+NSG+L+A+LHE++T+   +++    + +++ V P D+ DS  +     WE  
Sbjct: 360 QLECLSPRNSGLLDALLHEAKTISSGKNHLSDKSANSSTVTPGDLADSCLNMCETEWEDY 419

Query: 383 GDPISPLAYSAASVFSEYTPI--SGSSLDEHHSAET 484
           GDPISPL +S  S+FSE TPI  SGSSLDEH  +ET
Sbjct: 420 GDPISPLGHSTTSIFSECTPISASGSSLDEHPPSET 455


>emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]
          Length = 455

 Score =  131 bits (330), Expect = 5e-29
 Identities = 78/156 (50%), Positives = 103/156 (66%), Gaps = 13/156 (8%)
 Frame = +2

Query: 56  HAFLNGNTSSSEPISRATKLELPSLQY-STQVGSCGAPSSPLPSLESVGTMIQLP----L 220
           HA LNGN S+S+PIS   KLELPSLQY  T +G  G  SSP P LESV   IQ P    +
Sbjct: 196 HALLNGNFSASKPISGPVKLELPSLQYLETDLGGWGTSSSPPPLLESVDAFIQSPPSGTV 255

Query: 221 MVDSLSPKNSGMLEAVLHESQTLKISRSN----NNSNALVMPHDVTDS--SSQNLVWEAD 382
            ++ LSP+NSG+L+A+LHE++T+   +++    + +++ V P D+ DS  +     WE  
Sbjct: 256 QLECLSPRNSGLLDALLHEAKTISSGKNHLSDKSANSSTVTPGDLADSCLNMCETEWEDY 315

Query: 383 GDPISPLAYSAASVFSEYTPI--SGSSLDEHHSAET 484
           GDPISPL +S  S+FSE TPI  SGSSLDEH  +ET
Sbjct: 316 GDPISPLGHSTTSIFSECTPISASGSSLDEHPPSET 351


>ref|XP_002298147.1| predicted protein [Populus trichocarpa] gi|222845405|gb|EEE82952.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score =  130 bits (327), Expect = 1e-28
 Identities = 86/151 (56%), Positives = 99/151 (65%), Gaps = 14/151 (9%)
 Frame = +2

Query: 56  HAFLNGNTSSS---EPISRATKLELPSLQYS-TQVGSCGAPSSPLPSLESVGTMIQLP-- 217
           HA LNGN+SSS   EPI RATKLELPSLQYS TQ  S G P+SPLPSLESV T IQ P  
Sbjct: 337 HAILNGNSSSSSSSEPIYRATKLELPSLQYSETQQDSWGTPASPLPSLESVDTFIQSPPT 396

Query: 218 --LMVDSLSPKNSGMLEAVLHESQTLKISRS---NNNSNALVMPHDVTDSSSQNLV---W 373
                D LSP++SG+LEAVL+ES+TLK S+    +  S+A V       SS  N     W
Sbjct: 397 KETKSDGLSPRSSGLLEAVLYESRTLKYSKKCPGHQTSDAFVPIGCGVHSSPLNACAAEW 456

Query: 374 EADGDPISPLAYSAASVFSEYTPISGSSLDE 466
           E   D  SP  +SA+S+FSE TPISGSS DE
Sbjct: 457 ELHADLNSPSGHSASSLFSECTPISGSSSDE 487


>ref|XP_003543825.1| PREDICTED: transcription factor GAMYB-like [Glycine max]
          Length = 524

 Score =  125 bits (313), Expect = 5e-27
 Identities = 76/156 (48%), Positives = 102/156 (65%), Gaps = 12/156 (7%)
 Frame = +2

Query: 56  HAFLNGNTSSSEPISRATKLELPSLQY-STQVGSCGAPSSPLPSLESVGTMIQLP----L 220
           HA LNGN S+S PI  A KLELPSLQY  TQ GS G P SPLPSLESV T+IQ P    +
Sbjct: 301 HAALNGNASASVPIFGAMKLELPSLQYPETQHGSWGPPMSPLPSLESVDTLIQSPTLEPI 360

Query: 221 MVDSLSPKNSGMLEAVLHESQTLKISRSNNN---SNALVMPHDVTDSSSQN----LVWEA 379
           + D +SP++SG+LEA+++ S++LK   SNN+      +   ++V + S+ N      W+ 
Sbjct: 361 LSDPISPQSSGLLEAIVYNSKSLK--GSNNDLLLQETIATANEVANISTLNHSFQTEWDE 418

Query: 380 DGDPISPLAYSAASVFSEYTPISGSSLDEHHSAETT 487
            GDP SPL  SAASV ++YTP+   S+D + S ET+
Sbjct: 419 LGDPNSPLGQSAASVLTDYTPVRMCSVDGYQSTETS 454


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