BLASTX nr result

ID: Atractylodes22_contig00052394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052394
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546296.1| PREDICTED: ribose-5-phosphate isomerase A-li...    59   3e-07
ref|XP_002317071.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002270834.1| PREDICTED: ribose-5-phosphate isomerase A [V...    57   2e-06
gb|ABK96323.1| unknown [Populus trichocarpa x Populus deltoides]       57   2e-06
gb|EEC76274.1| hypothetical protein OsI_13748 [Oryza sativa Indi...    55   4e-06

>ref|XP_003546296.1| PREDICTED: ribose-5-phosphate isomerase A-like [Glycine max]
          Length = 291

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/57 (52%), Positives = 42/57 (73%)
 Frame = +2

Query: 77  KSRSRPNSKALITTSSFNHTNVILFEAAKHTVDAYLQSGMVVGLGSGVASSLAIQYL 247
           + R RPN   ++T S  + ++ +L  AA+HTVD Y++SGMVVGLGSG AS +AIQ+L
Sbjct: 25  RRRCRPNFLRMVTRSCLDDSSALL-RAAQHTVDTYVKSGMVVGLGSGHASGMAIQHL 80


>ref|XP_002317071.1| predicted protein [Populus trichocarpa] gi|222860136|gb|EEE97683.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 9/67 (13%)
 Frame = +2

Query: 74  VKSRSRPNSKA---------LITTSSFNHTNVILFEAAKHTVDAYLQSGMVVGLGSGVAS 226
           +K+ S+P S +         L+T +    ++ +L  AAKHTVD ++QSGMVVGLGSG AS
Sbjct: 17  IKTSSKPRSSSRTCKKTVPFLVTRAD---SSSLLLHAAKHTVDKHIQSGMVVGLGSGQAS 73

Query: 227 SLAIQYL 247
            LAIQYL
Sbjct: 74  GLAIQYL 80


>ref|XP_002270834.1| PREDICTED: ribose-5-phosphate isomerase A [Vitis vinifera]
           gi|296089229|emb|CBI39001.3| unnamed protein product
           [Vitis vinifera]
          Length = 294

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/46 (58%), Positives = 34/46 (73%)
 Frame = +2

Query: 110 ITTSSFNHTNVILFEAAKHTVDAYLQSGMVVGLGSGVASSLAIQYL 247
           +T S     +  L +AAKHTVD Y++SGMV+GLGSG AS +AIQYL
Sbjct: 38  VTRSCLADASSALLQAAKHTVDTYIKSGMVIGLGSGHASDMAIQYL 83


>gb|ABK96323.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 285

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 9/67 (13%)
 Frame = +2

Query: 74  VKSRSRPNSKA---------LITTSSFNHTNVILFEAAKHTVDAYLQSGMVVGLGSGVAS 226
           +K+ S+P S +         L+T +    ++ +L  AAKHTVD ++QSGMVVGLGSG AS
Sbjct: 17  IKTSSKPRSSSRTCKKTVPFLVTRAD---SSSLLLHAAKHTVDKHIQSGMVVGLGSGQAS 73

Query: 227 SLAIQYL 247
            +AIQYL
Sbjct: 74  GMAIQYL 80


>gb|EEC76274.1| hypothetical protein OsI_13748 [Oryza sativa Indica Group]
          Length = 312

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/55 (54%), Positives = 39/55 (70%)
 Frame = +2

Query: 83  RSRPNSKALITTSSFNHTNVILFEAAKHTVDAYLQSGMVVGLGSGVASSLAIQYL 247
           R R   +A+   ++ +   V LF+AAK TVD +++SGMVVGLGSG AS LAIQYL
Sbjct: 34  RRRSRRRAVTCAAAADADVVGLFDAAKLTVDRFVESGMVVGLGSGPASGLAIQYL 88


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