BLASTX nr result

ID: Atractylodes22_contig00052385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052385
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]    60   2e-07
ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854...    57   2e-06
gb|ACN78974.1| retrotransposon protein [Glycine max] gi|22501615...    56   3e-06
ref|XP_003520335.1| PREDICTED: uncharacterized protein LOC100785...    55   8e-06

>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
 Frame = -2

Query: 214 RDDTEFPWGQQHN-----PRRHNMKEFPKFEGGDPRGWILKAEKYFRFYQTPDNLMVEVV 50
           RD++  P   + N     P +H    FPKF G DP GWI KAE+YF F        V++ 
Sbjct: 61  RDESSHPHTARSNTINDHPHQHLKLSFPKFNGDDPTGWIYKAEQYFDFMNITPGQQVQLA 120

Query: 49  SMYLEGDALDLFAWI 5
           S +LEG AL    W+
Sbjct: 121 SFHLEGIALQWHRWL 135


>ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
          Length = 2807

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 21/50 (42%), Positives = 33/50 (66%)
 Frame = -2

Query: 154 EFPKFEGGDPRGWILKAEKYFRFYQTPDNLMVEVVSMYLEGDALDLFAWI 5
           E PKF G DP GW+ + E++F F+ TP+ L + +VS ++EG A   + W+
Sbjct: 261 EIPKFNGTDPHGWVFRVEEFFDFHGTPEPLRLRIVSFHMEGPAAGWYQWM 310


>gb|ACN78974.1| retrotransposon protein [Glycine max] gi|225016158|gb|ACN78981.1|
           retrotransposon protein [Glycine max]
          Length = 1261

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/65 (36%), Positives = 35/65 (53%)
 Frame = -2

Query: 196 PWGQQHNPRRHNMKEFPKFEGGDPRGWILKAEKYFRFYQTPDNLMVEVVSMYLEGDALDL 17
           P     NP      E  +F G DP GWI K  ++F ++ TPD+  + + S Y+EG AL  
Sbjct: 50  PGATTTNPTYRMKLEVSRFNGSDPEGWIFKITQFFEYHATPDHERLTIASFYMEGLALAW 109

Query: 16  FAWIN 2
           F W++
Sbjct: 110 FQWMH 114


>ref|XP_003520335.1| PREDICTED: uncharacterized protein LOC100785238 [Glycine max]
          Length = 498

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/60 (41%), Positives = 37/60 (61%)
 Frame = -2

Query: 184 QHNPRRHNMKEFPKFEGGDPRGWILKAEKYFRFYQTPDNLMVEVVSMYLEGDALDLFAWI 5
           +H P R N+ E P F+G D   WI+K  ++F ++ TPD+  ++V   YL+G AL  F WI
Sbjct: 58  RHQPPRMNL-EVPCFDGTDTMSWIIKISQFFDYHGTPDDERLQVAFFYLDGLALSWFQWI 116


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