BLASTX nr result

ID: Atractylodes22_contig00052348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052348
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36552.3| unnamed protein product [Vitis vinifera]              112   3e-23
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
ref|XP_002309359.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   107   8e-22
ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22

>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/76 (73%), Positives = 62/76 (81%)
 Frame = +3

Query: 3   NVGYHVLLSNIYTADKNYHEAASVRQVVRNRNLAKTLGCTLIEINKIPHVFTSGQQSHPQ 182
           NVGY+VLLSNIY+A +NY EAASVR VV+ R LAKT GCTLIE+    H+FTSG QSHPQ
Sbjct: 556 NVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQ 615

Query: 183 TEAIYAMLEKLMGKMR 230
             AIYAMLEKL GKMR
Sbjct: 616 ATAIYAMLEKLTGKMR 631


>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/76 (73%), Positives = 62/76 (81%)
 Frame = +3

Query: 3   NVGYHVLLSNIYTADKNYHEAASVRQVVRNRNLAKTLGCTLIEINKIPHVFTSGQQSHPQ 182
           NVGY+VLLSNIY+A +NY EAASVR VV+ R LAKT GCTLIE+    H+FTSG QSHPQ
Sbjct: 611 NVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQ 670

Query: 183 TEAIYAMLEKLMGKMR 230
             AIYAMLEKL GKMR
Sbjct: 671 ATAIYAMLEKLTGKMR 686


>ref|XP_002309359.1| predicted protein [Populus trichocarpa] gi|222855335|gb|EEE92882.1|
           predicted protein [Populus trichocarpa]
          Length = 605

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/75 (66%), Positives = 64/75 (85%)
 Frame = +3

Query: 3   NVGYHVLLSNIYTADKNYHEAASVRQVVRNRNLAKTLGCTLIEINKIPHVFTSGQQSHPQ 182
           N+GY+VL+SNIY+ ++ Y +AASVRQV + + LAKT GCTLIEI ++PHVFTSG QSHPQ
Sbjct: 435 NIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQ 494

Query: 183 TEAIYAMLEKLMGKM 227
           ++AIYA L+KL GKM
Sbjct: 495 SKAIYAELDKLTGKM 509


>ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/76 (69%), Positives = 63/76 (82%)
 Frame = +3

Query: 3   NVGYHVLLSNIYTADKNYHEAASVRQVVRNRNLAKTLGCTLIEINKIPHVFTSGQQSHPQ 182
           NVGY+VLLSNIY+ D+N+ +AASVRQVV+ R LAKT GCTLIEI+   +VFTSG +SHPQ
Sbjct: 617 NVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQ 676

Query: 183 TEAIYAMLEKLMGKMR 230
             AI+ MLEKL GKMR
Sbjct: 677 ATAIFEMLEKLTGKMR 692


>ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/76 (69%), Positives = 63/76 (82%)
 Frame = +3

Query: 3   NVGYHVLLSNIYTADKNYHEAASVRQVVRNRNLAKTLGCTLIEINKIPHVFTSGQQSHPQ 182
           NVGY+VLLSNIY+ D+N+ +AASVRQVV+ R LAKT GCTLIEI+   +VFTSG +SHPQ
Sbjct: 617 NVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQ 676

Query: 183 TEAIYAMLEKLMGKMR 230
             AI+ MLEKL GKMR
Sbjct: 677 ATAIFEMLEKLTGKMR 692


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