BLASTX nr result

ID: Atractylodes22_contig00052343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052343
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530366.1| Transmembrane and coiled-coil domains protei...   165   3e-39
ref|XP_002871226.1| hypothetical protein ARALYDRAFT_908596 [Arab...   163   1e-38
gb|AFW90618.1| transmembrane and coiled-coil domains protein [So...   162   3e-38
gb|AFK35793.1| unknown [Medicago truncatula]                          162   3e-38
ref|XP_003624576.1| Transmembrane and coiled-coil domain-contain...   162   3e-38

>ref|XP_002530366.1| Transmembrane and coiled-coil domains protein, putative [Ricinus
           communis] gi|223530113|gb|EEF32027.1| Transmembrane and
           coiled-coil domains protein, putative [Ricinus communis]
          Length = 192

 Score =  165 bits (418), Expect = 3e-39
 Identities = 87/120 (72%), Positives = 96/120 (80%), Gaps = 2/120 (1%)
 Frame = +3

Query: 12  AMVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKNDSTAL--KKSKTKKIDRVETSLK 185
           A+VCEAISW+LIYR  SY+SLKS+IDKASKKLETMK D+T +  KKSKTKKIDRVETSLK
Sbjct: 26  AVVCEAISWILIYRTNSYRSLKSSIDKASKKLETMKTDTTKIITKKSKTKKIDRVETSLK 85

Query: 186 ESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLYEGKAVAKLPFVPLRIVQKMSHRGLQGDD 365
           ESSRDLSLFKFKS               NSL+EGK VAKLPF P+ IV+KMSHRGLQGDD
Sbjct: 86  ESSRDLSLFKFKSGAVVALVLFIVFGLLNSLFEGKVVAKLPFTPIAIVRKMSHRGLQGDD 145


>ref|XP_002871226.1| hypothetical protein ARALYDRAFT_908596 [Arabidopsis lyrata subsp.
           lyrata] gi|297317063|gb|EFH47485.1| hypothetical protein
           ARALYDRAFT_908596 [Arabidopsis lyrata subsp. lyrata]
          Length = 196

 Score =  163 bits (413), Expect = 1e-38
 Identities = 87/125 (69%), Positives = 98/125 (78%), Gaps = 4/125 (3%)
 Frame = +3

Query: 3   FFNAMVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKNDST----ALKKSKTKKIDRV 170
           F  A+VCEAISW+LIYR +SYKSLKS+IDKASKKLETMK D+     A+KKSKTKKIDRV
Sbjct: 24  FCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLETMKTDNPSSKLAIKKSKTKKIDRV 83

Query: 171 ETSLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLYEGKAVAKLPFVPLRIVQKMSHRG 350
           E+SLKESSRDLSLFKFKS               NSL+EGK VAKLPF P+ IV+KMSHRG
Sbjct: 84  ESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFHPITIVRKMSHRG 143

Query: 351 LQGDD 365
           L+GDD
Sbjct: 144 LKGDD 148


>gb|AFW90618.1| transmembrane and coiled-coil domains protein [Solanum tuberosum]
          Length = 194

 Score =  162 bits (410), Expect = 3e-38
 Identities = 88/122 (72%), Positives = 94/122 (77%), Gaps = 4/122 (3%)
 Frame = +3

Query: 12  AMVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKND----STALKKSKTKKIDRVETS 179
           A+VCEAIS+LLIYR TSYKSLKSTIDKASKKLETMK      S   KKSKTKKIDRVETS
Sbjct: 26  AIVCEAISYLLIYRTTSYKSLKSTIDKASKKLETMKTQEPVPSVLTKKSKTKKIDRVETS 85

Query: 180 LKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLYEGKAVAKLPFVPLRIVQKMSHRGLQG 359
           LKES+RDLSLFKFKS               NSL+EGK VAKLPF+P R+VQKMSHRGL G
Sbjct: 86  LKESTRDLSLFKFKSGFVVAVVLFMVFGFLNSLFEGKVVAKLPFIPFRLVQKMSHRGLPG 145

Query: 360 DD 365
           DD
Sbjct: 146 DD 147


>gb|AFK35793.1| unknown [Medicago truncatula]
          Length = 189

 Score =  162 bits (410), Expect = 3e-38
 Identities = 86/124 (69%), Positives = 95/124 (76%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   FFNAMVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKNDSTAL--KKSKTKKIDRVET 176
           F  A+VCEAISW+LIYR  SYK+L+S+IDKASKKLETMK DS  +  KKSKTKKIDRVET
Sbjct: 21  FCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNKINIKKSKTKKIDRVET 80

Query: 177 SLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLYEGKAVAKLPFVPLRIVQKMSHRGLQ 356
           SLKESSRDLSLFKFKS               NSL+EGK VAKLPF P  +V KMSHRGLQ
Sbjct: 81  SLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQ 140

Query: 357 GDDP 368
           G+DP
Sbjct: 141 GNDP 144


>ref|XP_003624576.1| Transmembrane and coiled-coil domain-containing protein [Medicago
           truncatula] gi|217071096|gb|ACJ83908.1| unknown
           [Medicago truncatula] gi|355499591|gb|AES80794.1|
           Transmembrane and coiled-coil domain-containing protein
           [Medicago truncatula] gi|388495052|gb|AFK35592.1|
           unknown [Medicago truncatula]
          Length = 189

 Score =  162 bits (410), Expect = 3e-38
 Identities = 86/124 (69%), Positives = 95/124 (76%), Gaps = 2/124 (1%)
 Frame = +3

Query: 3   FFNAMVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKNDSTAL--KKSKTKKIDRVET 176
           F  A+VCEAISW+LIYR  SYK+L+S+IDKASKKLETMK DS  +  KKSKTKKIDRVET
Sbjct: 21  FCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNKINIKKSKTKKIDRVET 80

Query: 177 SLKESSRDLSLFKFKSXXXXXXXXXXXXXXXNSLYEGKAVAKLPFVPLRIVQKMSHRGLQ 356
           SLKESSRDLSLFKFKS               NSL+EGK VAKLPF P  +V KMSHRGLQ
Sbjct: 81  SLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQ 140

Query: 357 GDDP 368
           G+DP
Sbjct: 141 GNDP 144


Top