BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052338
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]                116   2e-24
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  114   8e-24
gb|ABF67921.1| Ji1 putative pol protein [Zea mays]                    114   8e-24
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]                114   8e-24
gb|AAO66559.1| putative copia-type pol polyprotein [Oryza sativa...   114   1e-23

>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
          Length = 2319

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/100 (58%), Positives = 72/100 (72%)
 Frame = +3

Query: 3    FLHAKSETTDIIIAFIKNKELKNDLKVKSVRSDHGTEFKNNTLNSFCCEKGISHNFSAVR 182
            FL  K ET +I+  F++  + + +LK+K VRSD+GTEFKN  +  F  E+GI H FS   
Sbjct: 964  FLSDKGETQEILKKFMRRAQNEFELKIKKVRSDNGTEFKNTGVEEFLGEEGIKHEFSVPY 1023

Query: 183  TPEQNGVVERKNRTLIEAARSMLREACLPTRFWAEAINTA 302
            TP+QNGVVERKNRTLIEAAR+ML E   P  FWAEA+NTA
Sbjct: 1024 TPQQNGVVERKNRTLIEAARTMLDEYKTPDNFWAEAVNTA 1063


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/100 (54%), Positives = 74/100 (74%)
 Frame = +3

Query: 3   FLHAKSETTDIIIAFIKNKELKNDLKVKSVRSDHGTEFKNNTLNSFCCEKGISHNFSAVR 182
           FL  KS+T + +  F++  + +  L++K +RSD+GTEFKN+ + SF  E+GI H FS+  
Sbjct: 219 FLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSSPY 278

Query: 183 TPEQNGVVERKNRTLIEAARSMLREACLPTRFWAEAINTA 302
           TP+QNGVVERKNRTL++ AR+ML E   P RFWAEA+NTA
Sbjct: 279 TPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWAEAVNTA 318


>gb|ABF67921.1| Ji1 putative pol protein [Zea mays]
          Length = 1063

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/100 (54%), Positives = 74/100 (74%)
 Frame = +3

Query: 3   FLHAKSETTDIIIAFIKNKELKNDLKVKSVRSDHGTEFKNNTLNSFCCEKGISHNFSAVR 182
           FL  KS+T + +  F++  + +  L++K +RSD+GTEFKN+ + SF  E+GI H FS+  
Sbjct: 219 FLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSSPY 278

Query: 183 TPEQNGVVERKNRTLIEAARSMLREACLPTRFWAEAINTA 302
           TP+QNGVVERKNRTL++ AR+ML E   P RFWAEA+NTA
Sbjct: 279 TPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWAEAVNTA 318


>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/100 (54%), Positives = 74/100 (74%)
 Frame = +3

Query: 3    FLHAKSETTDIIIAFIKNKELKNDLKVKSVRSDHGTEFKNNTLNSFCCEKGISHNFSAVR 182
            FL  KS+T + +  F++  + +  L++K +RSD+GTEFKN+ + SF  E+GI H FS+  
Sbjct: 1048 FLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSSPY 1107

Query: 183  TPEQNGVVERKNRTLIEAARSMLREACLPTRFWAEAINTA 302
            TP+QNGVVERKNRTL++ AR+ML E   P RFWAEA+NTA
Sbjct: 1108 TPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWAEAVNTA 1147


>gb|AAO66559.1| putative copia-type pol polyprotein [Oryza sativa Japonica Group]
            gi|108709148|gb|ABF96943.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 2027

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/100 (57%), Positives = 71/100 (71%)
 Frame = +3

Query: 3    FLHAKSETTDIIIAFIKNKELKNDLKVKSVRSDHGTEFKNNTLNSFCCEKGISHNFSAVR 182
            FLH KSET  I   F +  + + DLK+K++RSD+G EFKN  + SF  E+GI H FSA  
Sbjct: 917  FLHDKSETQAIFKKFARRAQNEFDLKIKNIRSDNGKEFKNTCIESFLDEEGIKHEFSAPY 976

Query: 183  TPEQNGVVERKNRTLIEAARSMLREACLPTRFWAEAINTA 302
            +P+QNGV ERKNRTLIE A++ML E     RFWAEA+NTA
Sbjct: 977  SPQQNGVAERKNRTLIEMAKTMLDEYKTSDRFWAEAVNTA 1016