BLASTX nr result

ID: Atractylodes22_contig00052303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052303
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr...   146   2e-33
emb|CBI37506.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr...   144   1e-32
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr...   141   5e-32
ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Vitis vinifera]
          Length = 636

 Score =  146 bits (368), Expect = 2e-33
 Identities = 73/102 (71%), Positives = 86/102 (84%), Gaps = 3/102 (2%)
 Frame = -2

Query: 314 AIMYVLCFRMRSILGIPRLKAQLFDMPIEAILKHRLNPLEVCLPSIVDEFLRQAKAARLF 135
           AIMYVLCFRMRS++ +P L++QL  +P+E ILKH L+PL+VCLPSIV+EFLRQAKAARLF
Sbjct: 436 AIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLF 495

Query: 134 HVLGTFVFH---ESELSKAFGGLERLDSFFPFDPYLLKKSDR 18
            V  TF+F    ESELS+AFGG+ERLD FFPFDP LLKK DR
Sbjct: 496 TVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDR 537


>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  146 bits (368), Expect = 2e-33
 Identities = 73/102 (71%), Positives = 86/102 (84%), Gaps = 3/102 (2%)
 Frame = -2

Query: 314 AIMYVLCFRMRSILGIPRLKAQLFDMPIEAILKHRLNPLEVCLPSIVDEFLRQAKAARLF 135
           AIMYVLCFRMRS++ +P L++QL  +P+E ILKH L+PL+VCLPSIV+EFLRQAKAARLF
Sbjct: 427 AIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKVCLPSIVEEFLRQAKAARLF 486

Query: 134 HVLGTFVFH---ESELSKAFGGLERLDSFFPFDPYLLKKSDR 18
            V  TF+F    ESELS+AFGG+ERLD FFPFDP LLKK DR
Sbjct: 487 TVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKCDR 528


>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Glycine max]
          Length = 627

 Score =  144 bits (362), Expect = 1e-32
 Identities = 71/101 (70%), Positives = 87/101 (86%), Gaps = 3/101 (2%)
 Frame = -2

Query: 314 AIMYVLCFRMRSILGIPRLKAQLFDMPIEAILKHRLNPLEVCLPSIVDEFLRQAKAARLF 135
           AIMY+LCFRMRS++ IPRLK QL +MP+EAILKH+L+PL+VCLP++V EFLRQAKAA+LF
Sbjct: 426 AIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQLF 485

Query: 134 HVLGTFVFH---ESELSKAFGGLERLDSFFPFDPYLLKKSD 21
               +FVF    ES+LSKAFGG++RLD FFPFDP LLKKS+
Sbjct: 486 MASESFVFDDMLESDLSKAFGGIDRLDMFFPFDPCLLKKSE 526


>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation
           factor RRN3-like [Glycine max]
          Length = 628

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/101 (67%), Positives = 87/101 (86%), Gaps = 3/101 (2%)
 Frame = -2

Query: 314 AIMYVLCFRMRSILGIPRLKAQLFDMPIEAILKHRLNPLEVCLPSIVDEFLRQAKAARLF 135
           AIMY++CFRMRS++ +PRLK QL +MP+EAILKH+L+PL+VCLP++V EFLRQAKAA+LF
Sbjct: 426 AIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQLF 485

Query: 134 HVLGTFVFH---ESELSKAFGGLERLDSFFPFDPYLLKKSD 21
               +FVF    ES+LSKAFGG++RLD FFPFDP LLK+S+
Sbjct: 486 MASESFVFDDMLESDLSKAFGGMDRLDMFFPFDPCLLKRSE 526


>ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|222856647|gb|EEE94194.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  139 bits (351), Expect = 2e-31
 Identities = 70/101 (69%), Positives = 81/101 (80%), Gaps = 3/101 (2%)
 Frame = -2

Query: 311 IMYVLCFRMRSILGIPRLKAQLFDMPIEAILKHRLNPLEVCLPSIVDEFLRQAKAARLFH 132
           IMYVLCF M+SI+ +P LK+QL  MPIE ILKH+L PLEVCLPSIV+EFL+QAKAA LF 
Sbjct: 439 IMYVLCFHMKSIMNVPTLKSQLLLMPIEPILKHKLGPLEVCLPSIVNEFLKQAKAAHLFT 498

Query: 131 VLGTFVFH---ESELSKAFGGLERLDSFFPFDPYLLKKSDR 18
           +   F+F    ES+LS+ FGGLERLD FFPFDP LLKK DR
Sbjct: 499 ISKAFIFEDLLESDLSRDFGGLERLDMFFPFDPCLLKKCDR 539


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