BLASTX nr result

ID: Atractylodes22_contig00052291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052291
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234078.1| expansin A3 precursor [Solanum lycopersicum]...    62   5e-08
gb|ADD14634.1| expansin precursor, partial [Solanum tuberosum]         57   2e-06
ref|XP_003616175.1| Expansin [Medicago truncatula] gi|355517510|...    55   8e-06

>ref|NP_001234078.1| expansin A3 precursor [Solanum lycopersicum]
           gi|4138912|gb|AAD13631.1| expansin precursor [Solanum
           lycopersicum]
          Length = 267

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/56 (53%), Positives = 35/56 (62%)
 Frame = +2

Query: 74  VFAGYPYSEEWRSXXXXXXXXXXXXXEVGGACGYGDLEKAGYGKATAGLSTVLFQK 241
           V A   +  EWR               VGGACGYGDLE++GYGK+TAGLSTVLF+K
Sbjct: 32  VAAAAAHPSEWRPGRATYYAPADPRDVVGGACGYGDLERSGYGKSTAGLSTVLFEK 87


>gb|ADD14634.1| expansin precursor, partial [Solanum tuberosum]
          Length = 209

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +2

Query: 155 VGGACGYGDLEKAGYGKATAGLSTVLFQK 241
           +GGACGYGDLE+ GYGKATAGLSTVLF K
Sbjct: 1   MGGACGYGDLERNGYGKATAGLSTVLFDK 29


>ref|XP_003616175.1| Expansin [Medicago truncatula] gi|355517510|gb|AES99133.1| Expansin
           [Medicago truncatula]
          Length = 266

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/51 (50%), Positives = 29/51 (56%)
 Frame = +2

Query: 89  PYSEEWRSXXXXXXXXXXXXXEVGGACGYGDLEKAGYGKATAGLSTVLFQK 241
           P   EWRS              VGGACGYGDL KAGYG +T GLS  LF++
Sbjct: 36  PSFTEWRSARATFYAQVDPRDTVGGACGYGDLTKAGYGMSTVGLSEALFER 86


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