BLASTX nr result

ID: Atractylodes22_contig00052277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052277
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...    56   3e-06
ref|XP_003520719.1| PREDICTED: RING-H2 finger protein ATL70-like...    56   3e-06
ref|XP_004161292.1| PREDICTED: putative RING-H2 finger protein A...    55   6e-06

>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
 Frame = -3

Query: 264 SFVLLLFIVTICYISYVCKRR---SIWSRXXXXXXXXXDHCMRLYE-GLEEDILSSFPTF 97
           S  +LL I TI   SY C R    S+ S+         +    + E GL+E  L S+PT 
Sbjct: 17  SIGILLLITTITLASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEIGLDEATLKSYPTL 76

Query: 96  LYSDKESHGGSG----CSICLADYKATDVIR-LPECG 1
           LYS+ + H        CSICLADYK+TD +R LP+CG
Sbjct: 77  LYSEAKLHKTDSTSTCCSICLADYKSTDKLRLLPDCG 113


>ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|222854305|gb|EEE91852.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
 Frame = -3

Query: 264 SFVLLLFIVTICYISYVCKRRSIWSRXXXXXXXXXDHCMRLYE-----GLEEDILSSFPT 100
           S  +LL I TI   SY C R  + S             + L       GL+E  L+S+PT
Sbjct: 9   SIGILLLITTITLTSYFCTRNQLASVPTQARNVADQQ-LNLQNFVVDIGLDEATLNSYPT 67

Query: 99  FLYSDKESHGGSG----CSICLADYKATDVIR-LPECG 1
            LYS+ + H        CSICLADYK TD +R LP+CG
Sbjct: 68  LLYSEAKLHKTGSTATCCSICLADYKNTDKLRLLPDCG 105


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
 Frame = -3

Query: 264 SFVLLLFIVTICYISYVCKRRSIWSRXXXXXXXXXDHCMRLYE--------GLEEDILSS 109
           S  LL+ I TI   SY C R  + S               + E        GL+++ ++S
Sbjct: 27  SLGLLILITTILLASYYCTRNGLSSSVVQRTPPNRSPPQAVGEMDSVVVDIGLDQETITS 86

Query: 108 FPTFLYSD----KESHGGSGCSICLADYKATDVIR-LPECG 1
           +P  LYS+    K     S CSICLADYK +DV+R LP+CG
Sbjct: 87  YPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCG 127


>ref|XP_003520719.1| PREDICTED: RING-H2 finger protein ATL70-like [Glycine max]
          Length = 171

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
 Frame = -3

Query: 264 SFVLLLFIVTICYISYVCKRRSIW------SRXXXXXXXXXDHCMRLYEGLEEDILSSFP 103
           S  +LL I+TI   SY C R  +       +R          H + +   L+E  + S+P
Sbjct: 28  SIGILLLIITITLTSYFCTRSQVSFAPATRNRRRTPNVLEPQHSI-VDVSLDEATILSYP 86

Query: 102 TFLYSD----KESHGGSGCSICLADYKATDVIR-LPECG 1
           T LYS+    K     + CSICLADYK TD++R LP+CG
Sbjct: 87  TLLYSEAKLKKSDSTATCCSICLADYKGTDMLRMLPDCG 125


>ref|XP_004161292.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 162

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
 Frame = -3

Query: 255 LLLFIVTICYISYVCKRRSIWS-RXXXXXXXXXDHCMRLYEGLEEDILSSFPTFLYSDK- 82
           +L  + T+   +Y+C R ++             D  +   +GLE+++++ +P  LYS+  
Sbjct: 25  ILFLLTTLTITTYLCTRTTVPPPNRRLPQGGRRDFVVDFVQGLEDEVINGYPKILYSEAK 84

Query: 81  -----ESHGGSGCSICLADYKATDVIR-LPECG 1
                ES   +GCSICL DYK  DV+R LP+CG
Sbjct: 85  LERKLESAATNGCSICLVDYKDDDVLRLLPDCG 117


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