BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052272
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   106   2e-21
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     106   2e-21
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   104   6e-21
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     103   1e-20
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   103   2e-20

>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
 Frame = -1

Query: 438 VSAHVLHMKSLVDQLERLDLTVPVELVTDLILNSLPKSFDQFIMNYNMNNWEKSISKLHL 259
           VS HV+ M    + L++L   +  EL TDLIL SLP SF+ FIMN+NMNN  +++++LH 
Sbjct: 225 VSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHG 284

Query: 258 MLKTAEKNIPTKASQVLTIREGKIKKPSTTPXXXXXXXXXXXKVPQVTPQAQTKKKEKVD 79
           MLKTAE++I   ++ V+ + + K       P              ++T  + +K K +  
Sbjct: 285 MLKTAEESIKKNSNHVMVMHKRK-------PNNKKSGQKRKLNSDEITSTSNSKTKVQKT 337

Query: 78  ---KDATCFHYNQVGHWRRNCPTYLAEKK 1
              KDA CF Y + GHW+RNC  YL + K
Sbjct: 338 GPAKDAECFFYKETGHWKRNCKKYLEQLK 366


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  106 bits (264), Expect = 2e-21
 Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
 Frame = -1

Query: 438 VSAHVLHMKSLVDQLERLDLTVPVELVTDLILNSLPKSFDQFIMNYNMNNWEKSISKLHL 259
           VS HV+ M    + L++L   +  EL TDLIL SLP SF+ FIMN+NMNN  +++++LH 
Sbjct: 225 VSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHG 284

Query: 258 MLKTAEKNIPTKASQVLTIREGKIKKPSTTPXXXXXXXXXXXKVPQVTPQAQTKKKEKVD 79
           MLKTAE++I   ++ V+ + + K       P              ++T  + +K K +  
Sbjct: 285 MLKTAEESIKKNSNHVMVMHKRK-------PNNKKSGQKRKLNSDEITSTSNSKTKVQKT 337

Query: 78  ---KDATCFHYNQVGHWRRNCPTYLAEKK 1
              KDA CF Y + GHW+RNC  YL + K
Sbjct: 338 GPAKDAECFFYKETGHWKRNCKKYLEQLK 366


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  104 bits (260), Expect = 6e-21
 Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
 Frame = -1

Query: 438 VSAHVLHMKSLVDQLERLDLTVPVELVTDLILNSLPKSFDQFIMNYNMNNWEKSISKLHL 259
           VS HV+ +    + L++L   +  EL TDLIL SLP SF+ FIMN+NMNN  +++++LH 
Sbjct: 212 VSPHVIKIIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRTLAELHG 271

Query: 258 MLKTAEKNIPTKASQVLTIREGKIKKPSTTPXXXXXXXXXXXKVPQVTPQAQTKKKEKVD 79
           MLKTAE++I   ++ V+ + + K       P              ++T  + +K K +  
Sbjct: 272 MLKTAEESIKKNSNHVMVMHKRK-------PNNKKSGQKRKLNSDEITSTSNSKTKVQKT 324

Query: 78  ---KDATCFHYNQVGHWRRNCPTYLAEKK 1
              KDA CF Y + GHW+RNC  YL + K
Sbjct: 325 GPAKDAECFFYKETGHWKRNCKKYLEQLK 353


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  103 bits (258), Expect = 1e-20
 Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
 Frame = -1

Query: 438 VSAHVLHMKSLVDQLERLDLTVPVELVTDLILNSLPKSFDQFIMNYNMNNWEKSISKLHL 259
           VS HV+ M   ++ LE+L   +  EL TD+IL SLP SF+ FI+NY+MNN ++++++LH 
Sbjct: 134 VSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMDRTLAELHG 193

Query: 258 MLKTAEKNIPTKASQVLTIREGKIKKPSTTPXXXXXXXXXXXKVPQVTPQAQTKKKEK-- 85
           MLKT E++I      V+ ++  K K P                 P     A   KK K  
Sbjct: 194 MLKTVEESIQKNGHHVMMMQNAKRKPP------VKKLCTKRKLTPDEIASASNAKKGKKG 247

Query: 84  -VDKDATCFHYNQVGHWRRNCPTYLAEKK 1
               DA CF+  + GHW+RNC  Y+ + K
Sbjct: 248 SAASDAVCFYCKETGHWKRNCKKYMEDLK 276


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
 Frame = -1

Query: 438 VSAHVLHMKSLVDQLERLDLTVPVELVTDLILNSLPKSFDQFIMNYNMNNWEKSISKLHL 259
           VS HV+ M      LE+L   +  EL TDLIL SLP+S+ QFI+N++MN  +K++++LH+
Sbjct: 137 VSPHVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQFILNFHMNGLDKNLTELHM 196

Query: 258 MLKTAEKNIPTKASQVLTIREG-KIKKPSTTPXXXXXXXXXXXKVPQVTPQAQTKKKEKV 82
           MLKTAE ++    + V+ +++    KK + T            K+   T + +TK K   
Sbjct: 197 MLKTAEGSVKKCNNHVIMVQKSTSFKKKAKTWIKKKGKAKVSDKIQ--TDKPKTKTKSGP 254

Query: 81  DKDATCFHYNQVGHWRRNCPTYLAEKK 1
            ++  CF+  ++GHW+RNC  YLA++K
Sbjct: 255 TQENECFYCKELGHWKRNCKKYLADQK 281