BLASTX nr result

ID: Atractylodes22_contig00052254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052254
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi...    75   6e-12
emb|CBI28459.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
emb|CBI34098.3| unnamed protein product [Vitis vinifera]               61   1e-07

>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 31/83 (37%), Positives = 55/83 (66%)
 Frame = +3

Query: 12  ESKVANKYFYAMVGRGLMPQYATYAVLIEENCRSGYITDAFSIFRCMLAGKAFSDIRTCK 191
           E ++A++YF  M+  G++P    Y  LIE +C+ G +T+AFS+FR +L+ +   D++T  
Sbjct: 545 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYS 604

Query: 192 ILVNGLMKCGRLEEVSGLLVELQ 260
           +L++GL + G++ E  G+  ELQ
Sbjct: 605 VLIHGLSRNGKMHEAFGIFSELQ 627


>emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 31/83 (37%), Positives = 55/83 (66%)
 Frame = +3

Query: 12  ESKVANKYFYAMVGRGLMPQYATYAVLIEENCRSGYITDAFSIFRCMLAGKAFSDIRTCK 191
           E ++A++YF  M+  G++P    Y  LIE +C+ G +T+AFS+FR +L+ +   D++T  
Sbjct: 536 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYS 595

Query: 192 ILVNGLMKCGRLEEVSGLLVELQ 260
           +L++GL + G++ E  G+  ELQ
Sbjct: 596 VLIHGLSRNGKMHEAFGIFSELQ 618


>ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|222868744|gb|EEF05875.1|
           predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/81 (40%), Positives = 48/81 (59%)
 Frame = +3

Query: 12  ESKVANKYFYAMVGRGLMPQYATYAVLIEENCRSGYITDAFSIFRCMLAGKAFSDIRTCK 191
           E +VA++YF  M+G G+ P       LI+  C+ G  T+A SIFRCML      D+RT  
Sbjct: 566 EMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYS 625

Query: 192 ILVNGLMKCGRLEEVSGLLVE 254
            L++GL++ G+L+    LL E
Sbjct: 626 ALIHGLLRNGKLQGAMELLSE 646


>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 47/79 (59%)
 Frame = +3

Query: 24  ANKYFYAMVGRGLMPQYATYAVLIEENCRSGYITDAFSIFRCMLAGKAFSDIRTCKILVN 203
           A KYF  M+  GLMP    Y VLI  + ++G + +A SIFR + A     D++TC   ++
Sbjct: 473 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 532

Query: 204 GLMKCGRLEEVSGLLVELQ 260
           GL+K GR++E   +  EL+
Sbjct: 533 GLLKNGRVQEALKVFSELK 551


>emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 47/79 (59%)
 Frame = +3

Query: 24  ANKYFYAMVGRGLMPQYATYAVLIEENCRSGYITDAFSIFRCMLAGKAFSDIRTCKILVN 203
           A KYF  M+  GLMP    Y VLI  + ++G + +A SIFR + A     D++TC   ++
Sbjct: 274 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIH 333

Query: 204 GLMKCGRLEEVSGLLVELQ 260
           GL+K GR++E   +  EL+
Sbjct: 334 GLLKNGRVQEALKVFSELK 352


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