BLASTX nr result
ID: Atractylodes22_contig00052081
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00052081 (250 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEV42261.1| hypothetical protein [Beta vulgaris] 57 7e-11 gb|ACY01928.1| hypothetical protein [Beta vulgaris] 54 5e-09 gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 53 5e-08 >gb|AEV42261.1| hypothetical protein [Beta vulgaris] Length = 1396 Score = 57.4 bits (137), Expect(3) = 7e-11 Identities = 26/52 (50%), Positives = 34/52 (65%) Frame = +1 Query: 28 KGHRLELPTFDGSDPDGWLLRAEKYCSLNRLTNEERLEVAVIAFKGTRSVGF 183 K RL+LP F G++PDGW+LR E+Y RL EE+LE AV+A G + F Sbjct: 78 KAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWF 129 Score = 27.3 bits (59), Expect(3) = 7e-11 Identities = 9/11 (81%), Positives = 10/11 (90%) Frame = +3 Query: 165 DALRWFQWEHR 197 +AL WFQWEHR Sbjct: 124 EALLWFQWEHR 134 Score = 26.2 bits (56), Expect(3) = 7e-11 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +2 Query: 200 RPSTCWEELRLMLLKQF 250 RP T W E++ MLL+QF Sbjct: 136 RPITGWPEMKAMLLRQF 152 >gb|ACY01928.1| hypothetical protein [Beta vulgaris] Length = 1583 Score = 54.3 bits (129), Expect(3) = 5e-09 Identities = 20/46 (43%), Positives = 34/46 (73%) Frame = +1 Query: 28 KGHRLELPTFDGSDPDGWLLRAEKYCSLNRLTNEERLEVAVIAFKG 165 + +L+LP F G++PDGW++RAE++ RLT +E++E AV++ G Sbjct: 98 RAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDG 143 Score = 26.9 bits (58), Expect(3) = 5e-09 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +3 Query: 165 DALRWFQWEHRRDQAH 212 +AL W+QWE+RR H Sbjct: 144 EALLWYQWENRRRPIH 159 Score = 23.1 bits (48), Expect(3) = 5e-09 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +2 Query: 200 RPSTCWEELRLMLLKQF 250 RP W E+R MLL++F Sbjct: 156 RPIHRWSEMRWMLLRRF 172 >gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris] Length = 1631 Score = 53.1 bits (126), Expect(2) = 5e-08 Identities = 20/43 (46%), Positives = 33/43 (76%) Frame = +1 Query: 37 RLELPTFDGSDPDGWLLRAEKYCSLNRLTNEERLEVAVIAFKG 165 +L++P FD +DPDGW+LR E++ + LT+ E++E AV+A +G Sbjct: 176 KLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEG 218 Score = 28.5 bits (62), Expect(2) = 5e-08 Identities = 9/12 (75%), Positives = 12/12 (100%) Frame = +3 Query: 165 DALRWFQWEHRR 200 DALRW+QWE++R Sbjct: 219 DALRWYQWENKR 230