BLASTX nr result

ID: Atractylodes22_contig00052070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052070
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   203   1e-50
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S...   199   3e-49
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   196   2e-48
gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit...   195   3e-48

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  203 bits (516), Expect = 1e-50
 Identities = 101/130 (77%), Positives = 111/130 (85%), Gaps = 9/130 (6%)
 Frame = -2

Query: 363  RMLHKVMQKVFALLLAEFRKLGATIIFANFSKVILDTGKSDLSAAQAYCDSLLKTLQTRD 184
            R+LHKVMQKVFALLLAEFRKLGATI+FANFSKVI+DTGKSDLSAA+AYCDSLLKTLQTRD
Sbjct: 1815 RILHKVMQKVFALLLAEFRKLGATIVFANFSKVIIDTGKSDLSAAKAYCDSLLKTLQTRD 1874

Query: 183  LFEWIELEPLQFWHSLLFMDQYNFGGIQAK---------SDQIDDSTHDDPQVDIVSSWN 31
            LFEWIE+EPL FWHSLLFMDQYN+GG+QA+         SD   +S  D+ QVDIVSSWN
Sbjct: 1875 LFEWIEIEPLHFWHSLLFMDQYNYGGVQARSHGGSLIGSSDPTSESIEDESQVDIVSSWN 1934

Query: 30   IAENLPKETQ 1
            IAE LPK  Q
Sbjct: 1935 IAEQLPKTIQ 1944


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  203 bits (516), Expect = 1e-50
 Identities = 101/130 (77%), Positives = 111/130 (85%), Gaps = 9/130 (6%)
 Frame = -2

Query: 363  RMLHKVMQKVFALLLAEFRKLGATIIFANFSKVILDTGKSDLSAAQAYCDSLLKTLQTRD 184
            R+LHKVMQKVFALLLAEFRKLGATI+FANFSKVI+DTGKSDLSAA+AYCDSLLKTLQTRD
Sbjct: 2324 RILHKVMQKVFALLLAEFRKLGATIVFANFSKVIIDTGKSDLSAAKAYCDSLLKTLQTRD 2383

Query: 183  LFEWIELEPLQFWHSLLFMDQYNFGGIQAK---------SDQIDDSTHDDPQVDIVSSWN 31
            LFEWIE+EPL FWHSLLFMDQYN+GG+QA+         SD   +S  D+ QVDIVSSWN
Sbjct: 2384 LFEWIEIEPLHFWHSLLFMDQYNYGGVQARSHGGSLIGSSDPTSESIEDESQVDIVSSWN 2443

Query: 30   IAENLPKETQ 1
            IAE LPK  Q
Sbjct: 2444 IAEQLPKTIQ 2453


>ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
            gi|241931984|gb|EES05129.1| hypothetical protein
            SORBIDRAFT_04g020730 [Sorghum bicolor]
          Length = 2135

 Score =  199 bits (505), Expect = 3e-49
 Identities = 95/121 (78%), Positives = 109/121 (90%)
 Frame = -2

Query: 363  RMLHKVMQKVFALLLAEFRKLGATIIFANFSKVILDTGKSDLSAAQAYCDSLLKTLQTRD 184
            R+LH VM+KVFALLLAEFRKLGA +IFANFSK+I+DTGK DLS+A AYCDSLLKTLQTRD
Sbjct: 1736 RLLHNVMKKVFALLLAEFRKLGANVIFANFSKIIIDTGKVDLSSAHAYCDSLLKTLQTRD 1795

Query: 183  LFEWIELEPLQFWHSLLFMDQYNFGGIQAKSDQIDDSTHDDPQVDIVSSWNIAENLPKET 4
            LFEWIELEPL FWHSLLFMDQYN+GGIQAK+  +D S  D+  +DIVSSWN+AE+LPK+T
Sbjct: 1796 LFEWIELEPLHFWHSLLFMDQYNYGGIQAKAQNVDSSDGDN-DIDIVSSWNMAEDLPKDT 1854

Query: 3    Q 1
            Q
Sbjct: 1855 Q 1855


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  196 bits (497), Expect = 2e-48
 Identities = 100/128 (78%), Positives = 108/128 (84%), Gaps = 7/128 (5%)
 Frame = -2

Query: 363  RMLHKVMQKVFALLLAEFRKLGATIIFANFSKVILDTGKSDLSAAQAYCDSLLKTLQTRD 184
            R+LHKVMQKVFALLLAEFRKLGATIIFANFSKVI+DTGK  LSAA+AYCDSLLKTLQTR+
Sbjct: 1818 RVLHKVMQKVFALLLAEFRKLGATIIFANFSKVIIDTGKFSLSAAKAYCDSLLKTLQTRE 1877

Query: 183  LFEWIELEPLQFWHSLLFMDQYNFGGIQAKSDQID-------DSTHDDPQVDIVSSWNIA 25
            LFEWIELEPLQFWHSLLFMDQYN+GGI A++D I         S   + QVDIVSSWNIA
Sbjct: 1878 LFEWIELEPLQFWHSLLFMDQYNYGGIPARADDISHSESQGAHSQRQESQVDIVSSWNIA 1937

Query: 24   ENLPKETQ 1
            E LPK  Q
Sbjct: 1938 EYLPKTIQ 1945


>gb|AFW71551.1| putative DNA polymerase epsilon catalytic subunit family protein [Zea
            mays]
          Length = 1717

 Score =  195 bits (496), Expect = 3e-48
 Identities = 93/121 (76%), Positives = 108/121 (89%)
 Frame = -2

Query: 363  RMLHKVMQKVFALLLAEFRKLGATIIFANFSKVILDTGKSDLSAAQAYCDSLLKTLQTRD 184
            R+LH VM+KVFALLLAE RKLGA +IFANFSK+I+DTGK DLS+A AYCDSLL+TLQTRD
Sbjct: 1320 RLLHNVMKKVFALLLAELRKLGANVIFANFSKIIIDTGKVDLSSAHAYCDSLLRTLQTRD 1379

Query: 183  LFEWIELEPLQFWHSLLFMDQYNFGGIQAKSDQIDDSTHDDPQVDIVSSWNIAENLPKET 4
            LFEWIELEPL FWHSLLFMDQYN+GGIQAK+  +D S  D+  +DIVSSWN+AE+LPK+T
Sbjct: 1380 LFEWIELEPLHFWHSLLFMDQYNYGGIQAKTQNVDSSDGDN-DIDIVSSWNMAEDLPKDT 1438

Query: 3    Q 1
            Q
Sbjct: 1439 Q 1439


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