BLASTX nr result

ID: Atractylodes22_contig00052066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052066
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB75932.1| putative protein [Arabidopsis thaliana]               156   5e-38
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   139   2e-31
emb|CBI37296.3| unnamed protein product [Vitis vinifera]              133   6e-31
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   136   2e-30
emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]   125   4e-28

>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  156 bits (395), Expect(2) = 5e-38
 Identities = 73/104 (70%), Positives = 84/104 (80%)
 Frame = +1

Query: 76  LEDRQGGEFISNEFGEFCKSQGINRQLTAAFIPHQNGVAERKNRTIMNAVRTVLNERQVP 255
           L   +GGEF SNEFGEFC+S GI+RQLTAAF P QNGVAERKNRTIMNAVR++L+ERQVP
Sbjct: 561 LRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVP 620

Query: 256 KVFWSGVVKRCVHVQNRCPTAALENKTPEEEWSSMKPTADYFRI 387
           K+FWS   K  VH+QNR PTAA+E  TPEE WS  KP  +YFR+
Sbjct: 621 KMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRV 664



 Score = 26.2 bits (56), Expect(2) = 5e-38
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 3   KSEAVANFKNFKMCVEKKV 59
           KSEA A FK FK  VEK++
Sbjct: 536 KSEAFATFKIFKASVEKEI 554


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  139 bits (351), Expect(2) = 2e-31
 Identities = 66/104 (63%), Positives = 77/104 (74%)
 Frame = +1

Query: 76  LEDRQGGEFISNEFGEFCKSQGINRQLTAAFIPHQNGVAERKNRTIMNAVRTVLNERQVP 255
           L   +GGEF SNEF  FC   GI RQLTAA+ P QNGVAERKNRTIMN VR++L+E+Q+P
Sbjct: 313 LRTDRGGEFTSNEFTSFCNENGILRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQIP 372

Query: 256 KVFWSGVVKRCVHVQNRCPTAALENKTPEEEWSSMKPTADYFRI 387
           K FW   V   VHV NR PT A++NKTPEE WS  KP+ D+FRI
Sbjct: 373 KTFWPEAVNWTVHVLNRSPTLAVKNKTPEEAWSGRKPSVDHFRI 416



 Score = 21.2 bits (43), Expect(2) = 2e-31
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 50  KESGAKIICLRTDR 91
           KE+GA I  LRTDR
Sbjct: 304 KETGAFIRSLRTDR 317


>emb|CBI37296.3| unnamed protein product [Vitis vinifera]
          Length = 3048

 Score =  133 bits (335), Expect(3) = 6e-31
 Identities = 62/104 (59%), Positives = 75/104 (72%)
 Frame = +1

Query: 76  LEDRQGGEFISNEFGEFCKSQGINRQLTAAFIPHQNGVAERKNRTIMNAVRTVLNERQVP 255
           L   +GGEF S EF  FC   GI RQLTAA+ P QNGVAERKNRTIMN VR++L+ +++P
Sbjct: 579 LRTDRGGEFTSQEFAIFCDVHGIRRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSAKKLP 638

Query: 256 KVFWSGVVKRCVHVQNRCPTAALENKTPEEEWSSMKPTADYFRI 387
           K FW   V   VHV NR PT A++NKTPEE W  +KP+ DYFR+
Sbjct: 639 KTFWPEAVNWTVHVLNRSPTFAVQNKTPEEAWGKLKPSVDYFRV 682



 Score = 25.0 bits (53), Expect(3) = 6e-31
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3

Query: 3   KSEAVANFKNFKMCVEKK 56
           KSEA A FK+FK  VEK+
Sbjct: 554 KSEAFAVFKSFKTYVEKE 571



 Score = 20.8 bits (42), Expect(3) = 6e-31
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 50  KESGAKIICLRTDR 91
           KE+ + + CLRTDR
Sbjct: 570 KETSSFLRCLRTDR 583


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/104 (61%), Positives = 77/104 (74%)
 Frame = +1

Query: 76  LEDRQGGEFISNEFGEFCKSQGINRQLTAAFIPHQNGVAERKNRTIMNAVRTVLNERQVP 255
           L   +GGEF S EF EFCKS GI RQLTAA+ P QNGVAER+NRTIMN VR+VL+E++VP
Sbjct: 428 LRTDRGGEFTSIEFNEFCKSSGIKRQLTAAYSPQQNGVAERRNRTIMNLVRSVLSEKRVP 487

Query: 256 KVFWSGVVKRCVHVQNRCPTAALENKTPEEEWSSMKPTADYFRI 387
           K +W   VK   HV NR PT  +++ TPEE WS +KP  DYFR+
Sbjct: 488 KSYWPEAVKWITHVLNRSPTLVVQDVTPEEAWSGIKPNVDYFRV 531


>emb|CAN66690.1| hypothetical protein VITISV_023209 [Vitis vinifera]
          Length = 1202

 Score =  125 bits (314), Expect(3) = 4e-28
 Identities = 57/105 (54%), Positives = 73/105 (69%)
 Frame = +1

Query: 73  LLEDRQGGEFISNEFGEFCKSQGINRQLTAAFIPHQNGVAERKNRTIMNAVRTVLNERQV 252
           +L   +GGE+ SNEF  FC  QGI R+LTAA+ P QNGV+ERKNRTI+N VR++L   ++
Sbjct: 484 ILRTDRGGEYCSNEFEHFCDDQGIRRELTAAYTPQQNGVSERKNRTILNMVRSLLARGKI 543

Query: 253 PKVFWSGVVKRCVHVQNRCPTAALENKTPEEEWSSMKPTADYFRI 387
           PK FW   V   +HV NR PT  ++N TPEE WS  KP  D+F+I
Sbjct: 544 PKSFWPEAVNWSIHVLNRSPTFXVQNMTPEEAWSGXKPAVDHFKI 588



 Score = 23.9 bits (50), Expect(3) = 4e-28
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 3   KSEAVANFKNFKMCVEKK 56
           KSEA + FK+FK  VEK+
Sbjct: 460 KSEAFSAFKSFKARVEKE 477



 Score = 20.4 bits (41), Expect(3) = 4e-28
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 50  KESGAKIICLRTDR 91
           KE+G  I  LRTDR
Sbjct: 476 KETGRSIKILRTDR 489


Top