BLASTX nr result

ID: Atractylodes22_contig00052007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052007
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...    72   5e-11
ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_003637168.1| Polynucleotidyl transferase [Medicago trunca...    61   1e-07
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    59   4e-07
ref|NP_001174791.1| Os06g0478500 [Oryza sativa Japonica Group] g...    57   2e-06

>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/55 (58%), Positives = 41/55 (74%)
 Frame = -1

Query: 193 LTKTKWDQIDAIVLSWIYGTITQDLLLTILKPGYTARDVWLRIKNLFHDNKNARA 29
           +T+ +W + D +V  WIYGTIT  LL TI+K G TARD+WL ++NLF DNK ARA
Sbjct: 62  MTEKRWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARA 116


>ref|XP_002337133.1| predicted protein [Populus trichocarpa] gi|222838337|gb|EEE76702.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/50 (56%), Positives = 38/50 (76%)
 Frame = -1

Query: 178 WDQIDAIVLSWIYGTITQDLLLTILKPGYTARDVWLRIKNLFHDNKNARA 29
           W ++DAIVL WIYGTI++DLL  IL+   TA   W R++++F DNKN+RA
Sbjct: 15  WSRVDAIVLQWIYGTISEDLLNIILERDSTAALAWNRLRDIFSDNKNSRA 64


>ref|XP_003637168.1| Polynucleotidyl transferase [Medicago truncatula]
           gi|355503103|gb|AES84306.1| Polynucleotidyl transferase
           [Medicago truncatula]
          Length = 239

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/51 (50%), Positives = 35/51 (68%)
 Frame = -1

Query: 181 KWDQIDAIVLSWIYGTITQDLLLTILKPGYTARDVWLRIKNLFHDNKNARA 29
           +W  +D+ VL WIY TI+ DLL TIL+P  T  + W R  ++F DN+NARA
Sbjct: 54  QWTTLDSTVLQWIYSTISTDLLTTILEPDSTTMEAWNRSSDIFQDNQNARA 104


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/51 (50%), Positives = 36/51 (70%)
 Frame = -1

Query: 181 KWDQIDAIVLSWIYGTITQDLLLTILKPGYTARDVWLRIKNLFHDNKNARA 29
           +W + D  V  WIYGTI++ ++ T+LK   TAR++WL I+ LF DNK ARA
Sbjct: 65  EWKERDGHVKMWIYGTISESIIDTVLKKNSTARELWLAIETLFLDNKEARA 115


>ref|NP_001174791.1| Os06g0478500 [Oryza sativa Japonica Group]
           gi|255677049|dbj|BAH93519.1| Os06g0478500 [Oryza sativa
           Japonica Group]
          Length = 374

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/50 (48%), Positives = 35/50 (70%)
 Frame = -1

Query: 178 WDQIDAIVLSWIYGTITQDLLLTILKPGYTARDVWLRIKNLFHDNKNARA 29
           W ++D +VL+W+YGTI  DLL T+L+P  TAR VWL ++ +F  +   RA
Sbjct: 229 WARMDCVVLAWLYGTIAADLLETVLQPVVTARQVWLCLEQMFLGHHEQRA 278


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