BLASTX nr result

ID: Atractylodes22_contig00052001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00052001
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...    80   2e-13
gb|AAO26685.1|AF478371_1 gag-pol polyprotein [Vitis vinifera]          68   9e-10
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            68   9e-10
gb|AAT38747.2| Polyprotein, putative [Solanum demissum]                65   8e-09
gb|AAO26686.1|AF478373_1 gag-pol polyprotein [Vitis vinifera]          60   1e-07

>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis sativus]
          Length = 2377

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/123 (39%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
 Frame = +2

Query: 2    SPIPSRQGEDDDLLIYSITYSEHVSKPDI--AKPPIVHVYSRRPPPNSG----PELASSS 163
            SP    Q EDD+L IY +T        D+  ++P I  VYSRRPPP       P +  SS
Sbjct: 1301 SPSSLCQREDDNLFIYEVTSPTPSLSTDVPPSRPLISQVYSRRPPPQPSDSCPPSMLPSS 1360

Query: 164  PDPVSSNDLPIALRKGKRQCTYLIXXXXXXXXXXXXXXXXXXXXXXXXISNTFREAISHP 343
             DP  S+DL IALRKGKR+CTY +                        I N   EA+SHP
Sbjct: 1361 CDPAPSDDLSIALRKGKRKCTYPVSSFISYHQLSPSTYAFITSLESTSIPNYVHEALSHP 1420

Query: 344  GWQ 352
             WQ
Sbjct: 1421 RWQ 1423


>gb|AAO26685.1|AF478371_1 gag-pol polyprotein [Vitis vinifera]
          Length = 373

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 48/141 (34%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
 Frame = +2

Query: 2   SPIPSRQGEDDDLLIYSITYSEHVS---------------------KPDIAKPPIVHVYS 118
           SP  S   ED++ L+Y +  S                          P  AKPPIV VYS
Sbjct: 52  SPTSSASDEDEEWLVYQVVNSRPTVGQSSVVDSDASLAHSGPVVNVPPTPAKPPIVQVYS 111

Query: 119 RRP-PPNSGPELASSSPDPVSSNDLPIALRKGKRQC--TYLIXXXXXXXXXXXXXXXXXX 289
           RRP   ++ P  A SS DP S  DLPI+LRKGKR C   Y I                  
Sbjct: 112 RRPMTTDTCPAPAPSSSDPSSDLDLPISLRKGKRHCKSIYSIANFVSYDHLSSSSSVLVA 171

Query: 290 XXXXXXISNTFREAISHPGWQ 352
                 +  T  EA++HPGW+
Sbjct: 172 SIDSISVPKTVTEALNHPGWK 192


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 25/142 (17%)
 Frame = +2

Query: 2    SPIPSRQGEDDDLLIYSITYSE----------------------HVSKPDIAKPPIVHVY 115
            SP  S   ED++ L+Y +  S                       H+  P  AKPPIV VY
Sbjct: 745  SPTSSASEEDEEWLVYQVVNSRPTVGQSSVVDSDASLAPSGPVVHIP-PAPAKPPIVQVY 803

Query: 116  SRRP-PPNSGPELASSSPDPVSSNDLPIALRKGKRQC--TYLIXXXXXXXXXXXXXXXXX 286
            SRRP   ++ P  A SS DP S  DLPI+LRKGKR C   Y I                 
Sbjct: 804  SRRPVTTDTCPAPAPSSSDPSSDLDLPISLRKGKRHCKSIYSIANFVSYDHLSSSSSVLV 863

Query: 287  XXXXXXXISNTFREAISHPGWQ 352
                   +  T  EA++HPGW+
Sbjct: 864  ASIDSISVPKTVTEALNHPGWK 885


>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 48/139 (34%), Positives = 59/139 (42%), Gaps = 29/139 (20%)
 Frame = +2

Query: 20   QGEDDDLLIYSITYSEHVSKPDI-------------------AKPPIVHVYSRRPPPNS- 139
            Q ED++ LIY  T S      ++                    KPPIV VYSRR   N  
Sbjct: 788  QQEDEEWLIYRTTPSRSEQHKEVPGSVEQSMENVSSDAPLAQTKPPIVQVYSRRQVTNDT 847

Query: 140  --GPELASSSPDPVSSN-----DLPIALRKGKRQC--TYLIXXXXXXXXXXXXXXXXXXX 292
               P L+SS P PV+ +     D+PIALRKGKRQC   Y I                   
Sbjct: 848  CPAPTLSSSDPLPVNPSPTENLDIPIALRKGKRQCPSIYSIANFISYDHLSPTSCSLIAS 907

Query: 293  XXXXXISNTFREAISHPGW 349
                 +  T REA++HPGW
Sbjct: 908  LDSIFVPKTVREALNHPGW 926


>gb|AAO26686.1|AF478373_1 gag-pol polyprotein [Vitis vinifera]
          Length = 225

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/92 (42%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
 Frame = +2

Query: 80  PDIAKPPIVHVYSRRPPP-NSGPELASSSPDPVSSNDLPIALRKGKRQC--TYLIXXXXX 250
           P   KPPIV VYSRRP   ++ P  ASSS DP S  DLPI+LRKGKR C   Y I     
Sbjct: 4   PAPVKPPIVQVYSRRPVTIDTCPAPASSSSDPSSDLDLPISLRKGKRHCKSIYSIANFVS 63

Query: 251 XXXXXXXXXXXXXXXXXXXISNTFREAISHPG 346
                              +  T  EA++HPG
Sbjct: 64  YDHVSSSSSVLVASIDSISVPKTVTEALNHPG 95


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